RNA–Protein interactions for RNA: ENST00000579894.5

ACADVL-222, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 429 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-222ENST00000579894 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
ACADVL-222ENST00000579894 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
ACADVL-222ENST00000579894 ABCC9O60706 1549 aa30.54■■■□□ 2.48
ACADVL-222ENST00000579894 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
ACADVL-222ENST00000579894 NACADO15069 1562 aa29.15■■■□□ 2.26
ACADVL-222ENST00000579894 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
ACADVL-222ENST00000579894 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
ACADVL-222ENST00000579894 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
ACADVL-222ENST00000579894 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
ACADVL-222ENST00000579894 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
ACADVL-222ENST00000579894 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
ACADVL-222ENST00000579894 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.142e-15■■■■□ 20.4
ACADVL-222ENST00000579894 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
ACADVL-222ENST00000579894 DNAJC5BQ9UF47 199 aa28.23■■■□□ 2.11
ACADVL-222ENST00000579894 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
ACADVL-222ENST00000579894 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
ACADVL-222ENST00000579894 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
ACADVL-222ENST00000579894 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
ACADVL-222ENST00000579894 SMARCA4P51532 1647 aa27■■□□□ 1.91
ACADVL-222ENST00000579894 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
ACADVL-222ENST00000579894 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
ACADVL-222ENST00000579894 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
ACADVL-222ENST00000579894 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
ACADVL-222ENST00000579894 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
ACADVL-222ENST00000579894 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
ACADVL-222ENST00000579894 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
ACADVL-222ENST00000579894 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
ACADVL-222ENST00000579894 WIZO95785 1651 aa26.44■■□□□ 1.82
ACADVL-222ENST00000579894 NESP48681 1621 aa26.36■■□□□ 1.81
ACADVL-222ENST00000579894 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
ACADVL-222ENST00000579894 LAMC3Q9Y6N6 1575 aa26.26■■□□□ 1.79
ACADVL-222ENST00000579894 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
ACADVL-222ENST00000579894 CUX2O14529 1486 aa26.17■■□□□ 1.78
ACADVL-222ENST00000579894 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
ACADVL-222ENST00000579894 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
ACADVL-222ENST00000579894 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
ACADVL-222ENST00000579894 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
ACADVL-222ENST00000579894 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
ACADVL-222ENST00000579894 CFTRP13569 1480 aa25.86■■□□□ 1.73
ACADVL-222ENST00000579894 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.73
ACADVL-222ENST00000579894 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
ACADVL-222ENST00000579894 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
ACADVL-222ENST00000579894 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
ACADVL-222ENST00000579894 WDR62O43379 1518 aa25.78■■□□□ 1.72
ACADVL-222ENST00000579894 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
ACADVL-222ENST00000579894 DNAJC5Q9H3Z4 198 aa25.62■■□□□ 1.69
ACADVL-222ENST00000579894 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
ACADVL-222ENST00000579894 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
ACADVL-222ENST00000579894 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
ACADVL-222ENST00000579894 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
ACADVL-222ENST00000579894 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
ACADVL-222ENST00000579894 IFT140Q96RY7 1462 aa25.26■■□□□ 1.63
ACADVL-222ENST00000579894 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
ACADVL-222ENST00000579894 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
ACADVL-222ENST00000579894 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
ACADVL-222ENST00000579894 POLA1P09884 1462 aaPredicted RBP25.13■■□□□ 1.61
ACADVL-222ENST00000579894 CUX1P39880 1505 aa25.08■■□□□ 1.61
ACADVL-222ENST00000579894 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
ACADVL-222ENST00000579894 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
ACADVL-222ENST00000579894 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.59
ACADVL-222ENST00000579894 SOGA1O94964 1423 aa24.96■■□□□ 1.59
ACADVL-222ENST00000579894 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
ACADVL-222ENST00000579894 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
ACADVL-222ENST00000579894 CHD1O14646 1710 aa24.91■■□□□ 1.58
ACADVL-222ENST00000579894 TDRD9Q8NDG6 1382 aaKnown RBP24.86■■□□□ 1.57
ACADVL-222ENST00000579894 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
ACADVL-222ENST00000579894 TOP2BQ02880 1626 aa24.8■■□□□ 1.56
ACADVL-222ENST00000579894 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
ACADVL-222ENST00000579894 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
ACADVL-222ENST00000579894 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
ACADVL-222ENST00000579894 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
ACADVL-222ENST00000579894 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
ACADVL-222ENST00000579894 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
ACADVL-222ENST00000579894 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
ACADVL-222ENST00000579894 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
ACADVL-222ENST00000579894 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
ACADVL-222ENST00000579894 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
ACADVL-222ENST00000579894 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
ACADVL-222ENST00000579894 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
ACADVL-222ENST00000579894 FBLN2P98095 1184 aa24.67■■□□□ 1.54
ACADVL-222ENST00000579894 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
ACADVL-222ENST00000579894 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
ACADVL-222ENST00000579894 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
ACADVL-222ENST00000579894 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
ACADVL-222ENST00000579894 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
ACADVL-222ENST00000579894 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
ACADVL-222ENST00000579894 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
ACADVL-222ENST00000579894 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
ACADVL-222ENST00000579894 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
ACADVL-222ENST00000579894 FHAD1B1AJZ9 1412 aa24.39■■□□□ 1.5
ACADVL-222ENST00000579894 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
ACADVL-222ENST00000579894 NUP160Q12769 1436 aa24.34■■□□□ 1.49
ACADVL-222ENST00000579894 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
ACADVL-222ENST00000579894 SHROOM2Q13796 1616 aa24.25■■□□□ 1.47
ACADVL-222ENST00000579894 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
ACADVL-222ENST00000579894 CUL7Q14999 1698 aa24.24■■□□□ 1.47
ACADVL-222ENST00000579894 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
ACADVL-222ENST00000579894 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
ACADVL-222ENST00000579894 IGF1RP08069 1367 aa24.16■■□□□ 1.46
ACADVL-222ENST00000579894 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms