RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
CDK5RAP3-216ENST00000579853 H7BZZ5 65 aa4.35□□□□□ -1.71
CDK5RAP3-216ENST00000579853 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
CDK5RAP3-216ENST00000579853 A0A0D9SG42 100 aa4.34□□□□□ -1.71
CDK5RAP3-216ENST00000579853 CCDC179H3BU77 68 aa4.3□□□□□ -1.72
CDK5RAP3-216ENST00000579853 MT1LQ93083 61 aa4.29□□□□□ -1.72
CDK5RAP3-216ENST00000579853 COA5Q86WW8 74 aa4.28□□□□□ -1.72
CDK5RAP3-216ENST00000579853 ATP5EP56381 51 aaPredicted RBP4.26□□□□□ -1.73
CDK5RAP3-216ENST00000579853 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
CDK5RAP3-216ENST00000579853 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
CDK5RAP3-216ENST00000579853 MT3P25713 68 aa4.25□□□□□ -1.73
CDK5RAP3-216ENST00000579853 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
CDK5RAP3-216ENST00000579853 TMEM258P61165 79 aa4.2□□□□□ -1.74
CDK5RAP3-216ENST00000579853 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
CDK5RAP3-216ENST00000579853 SEC61GP60059 68 aa4.17□□□□□ -1.74
CDK5RAP3-216ENST00000579853 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
CDK5RAP3-216ENST00000579853 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
CDK5RAP3-216ENST00000579853 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CDK5RAP3-216ENST00000579853 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
CDK5RAP3-216ENST00000579853 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CDK5RAP3-216ENST00000579853 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
CDK5RAP3-216ENST00000579853 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
CDK5RAP3-216ENST00000579853 A0A1B0GU69 56 aa4.07□□□□□ -1.76
CDK5RAP3-216ENST00000579853 A0A1B0GU33 70 aa4.05□□□□□ -1.76
CDK5RAP3-216ENST00000579853 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
CDK5RAP3-216ENST00000579853 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
CDK5RAP3-216ENST00000579853 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
CDK5RAP3-216ENST00000579853 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
CDK5RAP3-216ENST00000579853 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
CDK5RAP3-216ENST00000579853 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
CDK5RAP3-216ENST00000579853 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
CDK5RAP3-216ENST00000579853 TNP1P09430 55 aa4.01□□□□□ -1.77
CDK5RAP3-216ENST00000579853 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
CDK5RAP3-216ENST00000579853 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
CDK5RAP3-216ENST00000579853 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
CDK5RAP3-216ENST00000579853 V9GYY9 64 aa3.97□□□□□ -1.77
CDK5RAP3-216ENST00000579853 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
CDK5RAP3-216ENST00000579853 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
CDK5RAP3-216ENST00000579853 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
CDK5RAP3-216ENST00000579853 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
CDK5RAP3-216ENST00000579853 Q1T7F1 81 aa3.92□□□□□ -1.78
CDK5RAP3-216ENST00000579853 UQCR11O14957 56 aa3.91□□□□□ -1.78
CDK5RAP3-216ENST00000579853 A8MU10 97 aa3.85□□□□□ -1.79
CDK5RAP3-216ENST00000579853 PSPHP1O15172 72 aa3.83□□□□□ -1.8
CDK5RAP3-216ENST00000579853 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
CDK5RAP3-216ENST00000579853 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
CDK5RAP3-216ENST00000579853 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CDK5RAP3-216ENST00000579853 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
CDK5RAP3-216ENST00000579853 K7ERS5 55 aa3.75□□□□□ -1.81
CDK5RAP3-216ENST00000579853 A6NED7 52 aa3.74□□□□□ -1.81
CDK5RAP3-216ENST00000579853 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
CDK5RAP3-216ENST00000579853 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
CDK5RAP3-216ENST00000579853 MT1AP04731 61 aa3.65□□□□□ -1.83
CDK5RAP3-216ENST00000579853 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
CDK5RAP3-216ENST00000579853 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
CDK5RAP3-216ENST00000579853 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
CDK5RAP3-216ENST00000579853 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
CDK5RAP3-216ENST00000579853 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
CDK5RAP3-216ENST00000579853 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
CDK5RAP3-216ENST00000579853 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
CDK5RAP3-216ENST00000579853 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CDK5RAP3-216ENST00000579853 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
CDK5RAP3-216ENST00000579853 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CDK5RAP3-216ENST00000579853 ROMO1P60602 79 aa3.5□□□□□ -1.85
CDK5RAP3-216ENST00000579853 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
CDK5RAP3-216ENST00000579853 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CDK5RAP3-216ENST00000579853 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
CDK5RAP3-216ENST00000579853 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CDK5RAP3-216ENST00000579853 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
CDK5RAP3-216ENST00000579853 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
CDK5RAP3-216ENST00000579853 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CDK5RAP3-216ENST00000579853 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
CDK5RAP3-216ENST00000579853 INE1O15225 51 aa2.43□□□□□ -2.02
CDK5RAP3-216ENST00000579853 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
CDK5RAP3-216ENST00000579853 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
CDK5RAP3-216ENST00000579853 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CDK5RAP3-216ENST00000579853 PRM1P04553 51 aa1.78□□□□□ -2.12
CDK5RAP3-216ENST00000579853 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms