RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
PRPF8-215ENST00000576958 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
PRPF8-215ENST00000576958 A0A1B0GU33 70 aa4.09□□□□□ -1.75
PRPF8-215ENST00000576958 A8MU10 97 aa4.09□□□□□ -1.75
PRPF8-215ENST00000576958 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
PRPF8-215ENST00000576958 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
PRPF8-215ENST00000576958 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
PRPF8-215ENST00000576958 PCP4P48539 62 aa4.05□□□□□ -1.76
PRPF8-215ENST00000576958 SERP2Q8N6R1 65 aa4.04□□□□□ -1.76
PRPF8-215ENST00000576958 SEC61GP60059 68 aa4.03□□□□□ -1.76
PRPF8-215ENST00000576958 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
PRPF8-215ENST00000576958 K7ERU9 68 aa3.98□□□□□ -1.77
PRPF8-215ENST00000576958 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
PRPF8-215ENST00000576958 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
PRPF8-215ENST00000576958 TNP1P09430 55 aa3.96□□□□□ -1.78
PRPF8-215ENST00000576958 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
PRPF8-215ENST00000576958 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
PRPF8-215ENST00000576958 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
PRPF8-215ENST00000576958 H7BZZ5 65 aa3.9□□□□□ -1.79
PRPF8-215ENST00000576958 A0A1B0GU69 56 aa3.89□□□□□ -1.79
PRPF8-215ENST00000576958 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PRPF8-215ENST00000576958 COX7CP15954 63 aa3.86□□□□□ -1.79
PRPF8-215ENST00000576958 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
PRPF8-215ENST00000576958 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
PRPF8-215ENST00000576958 ANAPC13Q9BS18 74 aa3.69□□□□□ -1.82
PRPF8-215ENST00000576958 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
PRPF8-215ENST00000576958 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
PRPF8-215ENST00000576958 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
PRPF8-215ENST00000576958 CCDC179H3BU77 68 aa3.63□□□□□ -1.83
PRPF8-215ENST00000576958 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
PRPF8-215ENST00000576958 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
PRPF8-215ENST00000576958 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
PRPF8-215ENST00000576958 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
PRPF8-215ENST00000576958 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
PRPF8-215ENST00000576958 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
PRPF8-215ENST00000576958 MT1AP04731 61 aa3.6□□□□□ -1.83
PRPF8-215ENST00000576958 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
PRPF8-215ENST00000576958 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
PRPF8-215ENST00000576958 UQCR11O14957 56 aa3.53□□□□□ -1.84
PRPF8-215ENST00000576958 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
PRPF8-215ENST00000576958 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
PRPF8-215ENST00000576958 TMEM258P61165 79 aa3.48□□□□□ -1.85
PRPF8-215ENST00000576958 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
PRPF8-215ENST00000576958 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
PRPF8-215ENST00000576958 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
PRPF8-215ENST00000576958 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
PRPF8-215ENST00000576958 PSPHP1O15172 72 aa3.35□□□□□ -1.87
PRPF8-215ENST00000576958 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
PRPF8-215ENST00000576958 K7ERS5 55 aa3.32□□□□□ -1.88
PRPF8-215ENST00000576958 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
PRPF8-215ENST00000576958 MT3P25713 68 aa3.25□□□□□ -1.89
PRPF8-215ENST00000576958 Q1T7F1 81 aa3.22□□□□□ -1.89
PRPF8-215ENST00000576958 V9GYY9 64 aa3.21□□□□□ -1.9
PRPF8-215ENST00000576958 BRK1Q8WUW1 75 aa3.2□□□□□ -1.9
PRPF8-215ENST00000576958 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
PRPF8-215ENST00000576958 ROMO1P60602 79 aa3.17□□□□□ -1.9
PRPF8-215ENST00000576958 A6NED7 52 aa3.14□□□□□ -1.91
PRPF8-215ENST00000576958 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
PRPF8-215ENST00000576958 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
PRPF8-215ENST00000576958 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
PRPF8-215ENST00000576958 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
PRPF8-215ENST00000576958 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
PRPF8-215ENST00000576958 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
PRPF8-215ENST00000576958 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
PRPF8-215ENST00000576958 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
PRPF8-215ENST00000576958 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
PRPF8-215ENST00000576958 NDUFAF8A1L188 74 aa2.57□□□□□ -2
PRPF8-215ENST00000576958 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
PRPF8-215ENST00000576958 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
PRPF8-215ENST00000576958 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
PRPF8-215ENST00000576958 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
PRPF8-215ENST00000576958 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
PRPF8-215ENST00000576958 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
PRPF8-215ENST00000576958 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
PRPF8-215ENST00000576958 INE1O15225 51 aa2.06□□□□□ -2.08
PRPF8-215ENST00000576958 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PRPF8-215ENST00000576958 PRM1P04553 51 aa1.67□□□□□ -2.14
PRPF8-215ENST00000576958 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms