RNA–Protein interactions for RNA: ENST00000575839.2

CIC-208, Transcript of capicua transcriptional repressor, humanhuman

TSL 5

Gene CIC, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-208ENST00000575839 A0A1B0GU69 56 aa5.5□□□□□ -1.53
CIC-208ENST00000575839 MT1LQ93083 61 aa5.49□□□□□ -1.53
CIC-208ENST00000575839 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
CIC-208ENST00000575839 A8MU10 97 aa5.42□□□□□ -1.54
CIC-208ENST00000575839 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
CIC-208ENST00000575839 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
CIC-208ENST00000575839 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
CIC-208ENST00000575839 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
CIC-208ENST00000575839 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
CIC-208ENST00000575839 TMEM258P61165 79 aa5.3□□□□□ -1.56
CIC-208ENST00000575839 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
CIC-208ENST00000575839 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
CIC-208ENST00000575839 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
CIC-208ENST00000575839 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
CIC-208ENST00000575839 UQCR11O14957 56 aa5.17□□□□□ -1.58
CIC-208ENST00000575839 TNP1P09430 55 aa5.17□□□□□ -1.58
CIC-208ENST00000575839 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
CIC-208ENST00000575839 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
CIC-208ENST00000575839 AHNAKQ09666 5890 aaKnown RBP5.12□□□□□ -1.59
CIC-208ENST00000575839 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
CIC-208ENST00000575839 PSPHP1O15172 72 aa5.05□□□□□ -1.6
CIC-208ENST00000575839 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
CIC-208ENST00000575839 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
CIC-208ENST00000575839 V9GYY9 64 aa5.01□□□□□ -1.61
CIC-208ENST00000575839 Q1T7F1 81 aa5□□□□□ -1.61
CIC-208ENST00000575839 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
CIC-208ENST00000575839 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
CIC-208ENST00000575839 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
CIC-208ENST00000575839 K7ERS5 55 aa4.94□□□□□ -1.62
CIC-208ENST00000575839 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
CIC-208ENST00000575839 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
CIC-208ENST00000575839 A6NED7 52 aa4.85□□□□□ -1.63
CIC-208ENST00000575839 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
CIC-208ENST00000575839 PCP4P48539 62 aa4.81□□□□□ -1.64
CIC-208ENST00000575839 RPS28P62857 69 aaKnown RBP4.8□□□□□ -1.64
CIC-208ENST00000575839 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
CIC-208ENST00000575839 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
CIC-208ENST00000575839 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
CIC-208ENST00000575839 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
CIC-208ENST00000575839 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
CIC-208ENST00000575839 MT1AP04731 61 aa4.66□□□□□ -1.66
CIC-208ENST00000575839 ROMO1P60602 79 aa4.64□□□□□ -1.67
CIC-208ENST00000575839 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
CIC-208ENST00000575839 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
CIC-208ENST00000575839 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
CIC-208ENST00000575839 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
CIC-208ENST00000575839 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CIC-208ENST00000575839 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
CIC-208ENST00000575839 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
CIC-208ENST00000575839 MT3P25713 68 aa4.28□□□□□ -1.72
CIC-208ENST00000575839 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
CIC-208ENST00000575839 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
CIC-208ENST00000575839 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CIC-208ENST00000575839 PMAIP1Q13794 54 aa4□□□□□ -1.77
CIC-208ENST00000575839 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CIC-208ENST00000575839 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
CIC-208ENST00000575839 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
CIC-208ENST00000575839 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
CIC-208ENST00000575839 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CIC-208ENST00000575839 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
CIC-208ENST00000575839 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
CIC-208ENST00000575839 H3BS24 57 aa3.51□□□□□ -1.85
CIC-208ENST00000575839 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
CIC-208ENST00000575839 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
CIC-208ENST00000575839 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
CIC-208ENST00000575839 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CIC-208ENST00000575839 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
CIC-208ENST00000575839 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
CIC-208ENST00000575839 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
CIC-208ENST00000575839 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
CIC-208ENST00000575839 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CIC-208ENST00000575839 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
CIC-208ENST00000575839 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CIC-208ENST00000575839 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
CIC-208ENST00000575839 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CIC-208ENST00000575839 PRM1P04553 51 aa2.39□□□□□ -2.03
CIC-208ENST00000575839 INE1O15225 51 aa2.06□□□□□ -2.08
CIC-208ENST00000575839 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 165.7 ms