RNA–Protein interactions for RNA: ENST00000574699.1

TNFRSF12A-205, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-205ENST00000574699 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
TNFRSF12A-205ENST00000574699 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
TNFRSF12A-205ENST00000574699 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
TNFRSF12A-205ENST00000574699 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
TNFRSF12A-205ENST00000574699 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
TNFRSF12A-205ENST00000574699 GPR98Q8WXG9 6306 aa6.65□□□□□ -1.34
TNFRSF12A-205ENST00000574699 MT4P47944 62 aa6.62□□□□□ -1.35
TNFRSF12A-205ENST00000574699 K7ERS5 55 aa6.59□□□□□ -1.35
TNFRSF12A-205ENST00000574699 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
TNFRSF12A-205ENST00000574699 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
TNFRSF12A-205ENST00000574699 V9GYY9 64 aa6.56□□□□□ -1.36
TNFRSF12A-205ENST00000574699 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
TNFRSF12A-205ENST00000574699 PSPHP1O15172 72 aa6.51□□□□□ -1.37
TNFRSF12A-205ENST00000574699 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
TNFRSF12A-205ENST00000574699 Q1T7F1 81 aa6.47□□□□□ -1.37
TNFRSF12A-205ENST00000574699 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
TNFRSF12A-205ENST00000574699 PCP4P48539 62 aa6.33□□□□□ -1.4
TNFRSF12A-205ENST00000574699 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
TNFRSF12A-205ENST00000574699 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
TNFRSF12A-205ENST00000574699 A6NED7 52 aa6.31□□□□□ -1.4
TNFRSF12A-205ENST00000574699 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
TNFRSF12A-205ENST00000574699 KRTAP5-5Q701N2 237 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF12A-205ENST00000574699 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
TNFRSF12A-205ENST00000574699 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
TNFRSF12A-205ENST00000574699 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
TNFRSF12A-205ENST00000574699 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
TNFRSF12A-205ENST00000574699 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
TNFRSF12A-205ENST00000574699 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
TNFRSF12A-205ENST00000574699 KRTAP12-4P60329 112 aa6.17□□□□□ -1.42
TNFRSF12A-205ENST00000574699 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
TNFRSF12A-205ENST00000574699 ROMO1P60602 79 aa6.09□□□□□ -1.43
TNFRSF12A-205ENST00000574699 RPS28P62857 69 aaKnown RBP6.08□□□□□ -1.44
TNFRSF12A-205ENST00000574699 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
TNFRSF12A-205ENST00000574699 KRTAP5-7Q6L8G8 165 aa5.98□□□□□ -1.45
TNFRSF12A-205ENST00000574699 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.45
TNFRSF12A-205ENST00000574699 MT1AP04731 61 aa5.86□□□□□ -1.47
TNFRSF12A-205ENST00000574699 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
TNFRSF12A-205ENST00000574699 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
TNFRSF12A-205ENST00000574699 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
TNFRSF12A-205ENST00000574699 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
TNFRSF12A-205ENST00000574699 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
TNFRSF12A-205ENST00000574699 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
TNFRSF12A-205ENST00000574699 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
TNFRSF12A-205ENST00000574699 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
TNFRSF12A-205ENST00000574699 MT3P25713 68 aa5.38□□□□□ -1.55
TNFRSF12A-205ENST00000574699 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
TNFRSF12A-205ENST00000574699 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
TNFRSF12A-205ENST00000574699 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
TNFRSF12A-205ENST00000574699 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
TNFRSF12A-205ENST00000574699 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
TNFRSF12A-205ENST00000574699 KRTAP5-1Q6L8H4 278 aa5.14□□□□□ -1.59
TNFRSF12A-205ENST00000574699 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
TNFRSF12A-205ENST00000574699 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
TNFRSF12A-205ENST00000574699 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
TNFRSF12A-205ENST00000574699 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
TNFRSF12A-205ENST00000574699 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
TNFRSF12A-205ENST00000574699 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
TNFRSF12A-205ENST00000574699 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
TNFRSF12A-205ENST00000574699 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
TNFRSF12A-205ENST00000574699 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
TNFRSF12A-205ENST00000574699 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
TNFRSF12A-205ENST00000574699 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
TNFRSF12A-205ENST00000574699 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
TNFRSF12A-205ENST00000574699 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
TNFRSF12A-205ENST00000574699 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
TNFRSF12A-205ENST00000574699 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
TNFRSF12A-205ENST00000574699 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
TNFRSF12A-205ENST00000574699 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
TNFRSF12A-205ENST00000574699 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
TNFRSF12A-205ENST00000574699 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
TNFRSF12A-205ENST00000574699 H3BS24 57 aa3.5□□□□□ -1.85
TNFRSF12A-205ENST00000574699 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
TNFRSF12A-205ENST00000574699 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
TNFRSF12A-205ENST00000574699 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
TNFRSF12A-205ENST00000574699 INE1O15225 51 aa3.1□□□□□ -1.91
TNFRSF12A-205ENST00000574699 PRM1P04553 51 aa3.1□□□□□ -1.91
TNFRSF12A-205ENST00000574699 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
TNFRSF12A-205ENST00000574699 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 26.6 ms