RNA–Protein interactions for RNA: ENST00000574699.1

TNFRSF12A-205, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-205ENST00000574699 NISCHQ9Y2I1 1504 aa47.71■■■■■ 5.23
TNFRSF12A-205ENST00000574699 CCDC180Q9P1Z9 1646 aa42.69■■■■■ 4.42
TNFRSF12A-205ENST00000574699 ABCC9O60706 1549 aa42.07■■■■■ 4.33
TNFRSF12A-205ENST00000574699 RB1CC1Q8TDY2 1594 aa40.35■■■■■ 4.05
TNFRSF12A-205ENST00000574699 NACADO15069 1562 aa40.19■■■■■ 4.02
TNFRSF12A-205ENST00000574699 DCAF8L2P0C7V8 631 aa39.98■■■■□ 3.99
TNFRSF12A-205ENST00000574699 MYO15BQ96JP2 1530 aa39.8■■■■□ 3.96
TNFRSF12A-205ENST00000574699 ZCCHC6Q5VYS8 1495 aaKnown RBP39.66■■■■□ 3.94
TNFRSF12A-205ENST00000574699 DCAF1Q9Y4B6 1507 aa39.47■■■■□ 3.91
TNFRSF12A-205ENST00000574699 UNC13AQ9UPW8 1703 aa39.47■■■■□ 3.91
TNFRSF12A-205ENST00000574699 PABPN1Q86U42 306 aaKnown RBP eCLIP39.18■■■■□ 3.86
TNFRSF12A-205ENST00000574699 BICRAQ9NZM4 1560 aa39.09■■■■□ 3.85
TNFRSF12A-205ENST00000574699 DNAJC5BQ9UF47 199 aa38.89■■■■□ 3.82
TNFRSF12A-205ENST00000574699 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
TNFRSF12A-205ENST00000574699 SHROOM4Q9ULL8 1493 aa38.71■■■■□ 3.79
TNFRSF12A-205ENST00000574699 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
TNFRSF12A-205ENST00000574699 CC2D2AQ9P2K1 1620 aa38.08■■■■□ 3.69
TNFRSF12A-205ENST00000574699 CECR2Q9BXF3 1484 aa37.86■■■■□ 3.65
TNFRSF12A-205ENST00000574699 SMARCA4P51532 1647 aa37.14■■■■□ 3.54
TNFRSF12A-205ENST00000574699 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
TNFRSF12A-205ENST00000574699 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
TNFRSF12A-205ENST00000574699 ATAD2BQ9ULI0 1458 aa37■■■■□ 3.51
TNFRSF12A-205ENST00000574699 SMARCA2P51531 1590 aa37■■■■□ 3.51
TNFRSF12A-205ENST00000574699 HMGXB3Q12766 1538 aa36.87■■■■□ 3.49
TNFRSF12A-205ENST00000574699 PEG3Q9GZU2 1588 aa36.78■■■■□ 3.48
TNFRSF12A-205ENST00000574699 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
TNFRSF12A-205ENST00000574699 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
TNFRSF12A-205ENST00000574699 WIZO95785 1651 aa36.36■■■■□ 3.41
TNFRSF12A-205ENST00000574699 ERCC6Q03468 1493 aa36.35■■■■□ 3.41
TNFRSF12A-205ENST00000574699 NESP48681 1621 aa36.27■■■■□ 3.4
TNFRSF12A-205ENST00000574699 LAMC3Q9Y6N6 1575 aa36.19■■■■□ 3.38
TNFRSF12A-205ENST00000574699 RSF1Q96T23 1441 aaPredicted RBP36.15■■■■□ 3.38
TNFRSF12A-205ENST00000574699 CUX2O14529 1486 aa36.11■■■■□ 3.37
TNFRSF12A-205ENST00000574699 TOP2AP11388 1531 aaKnown RBP35.96■■■■□ 3.35
TNFRSF12A-205ENST00000574699 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
TNFRSF12A-205ENST00000574699 CADPSQ9ULU8 1353 aa35.92■■■■□ 3.34
TNFRSF12A-205ENST00000574699 KIF21AQ7Z4S6 1674 aa35.92■■■■□ 3.34
TNFRSF12A-205ENST00000574699 THOC2Q8NI27 1593 aaKnown RBP35.87■■■■□ 3.33
TNFRSF12A-205ENST00000574699 CFTRP13569 1480 aa35.64■■■■□ 3.3
TNFRSF12A-205ENST00000574699 MRC2Q9UBG0 1479 aa35.59■■■■□ 3.29
TNFRSF12A-205ENST00000574699 CEP164Q9UPV0 1460 aa35.56■■■■□ 3.28
TNFRSF12A-205ENST00000574699 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
TNFRSF12A-205ENST00000574699 WDR62O43379 1518 aa35.49■■■■□ 3.27
TNFRSF12A-205ENST00000574699 PRDM2Q13029 1718 aa35.49■■■■□ 3.27
TNFRSF12A-205ENST00000574699 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
TNFRSF12A-205ENST00000574699 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
TNFRSF12A-205ENST00000574699 URB2Q14146 1524 aaKnown RBP35.2■■■■□ 3.23
TNFRSF12A-205ENST00000574699 TOPBP1Q92547 1522 aa34.94■■■■□ 3.18
TNFRSF12A-205ENST00000574699 ABCC8Q09428 1581 aa34.94■■■■□ 3.18
TNFRSF12A-205ENST00000574699 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
TNFRSF12A-205ENST00000574699 DNMBPQ6XZF7 1577 aa34.88■■■■□ 3.17
TNFRSF12A-205ENST00000574699 IFT140Q96RY7 1462 aa34.82■■■■□ 3.16
TNFRSF12A-205ENST00000574699 ZNF608Q9ULD9 1512 aaPredicted RBP34.66■■■■□ 3.14
TNFRSF12A-205ENST00000574699 POLA1P09884 1462 aaPredicted RBP34.6■■■■□ 3.13
TNFRSF12A-205ENST00000574699 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
TNFRSF12A-205ENST00000574699 EIF4G3O43432 1585 aaKnown RBP34.58■■■■□ 3.13
TNFRSF12A-205ENST00000574699 CUX1P39880 1505 aa34.5■■■■□ 3.11
TNFRSF12A-205ENST00000574699 OSCARQ8IYS5 282 aa34.48■■■■□ 3.11
TNFRSF12A-205ENST00000574699 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
TNFRSF12A-205ENST00000574699 SOGA1O94964 1423 aa34.44■■■■□ 3.1
TNFRSF12A-205ENST00000574699 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
TNFRSF12A-205ENST00000574699 AQRO60306 1485 aaKnown RBP eCLIP34.4■■■■□ 3.12e-6■■■■■ 28.3
TNFRSF12A-205ENST00000574699 WDR97A6NE52 1622 aa34.36■■■■□ 3.09
TNFRSF12A-205ENST00000574699 TDRD9Q8NDG6 1382 aaKnown RBP34.27■■■■□ 3.08
TNFRSF12A-205ENST00000574699 CHD1O14646 1710 aa34.26■■■■□ 3.07
TNFRSF12A-205ENST00000574699 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
TNFRSF12A-205ENST00000574699 TOP2BQ02880 1626 aa34.13■■■■□ 3.05
TNFRSF12A-205ENST00000574699 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
TNFRSF12A-205ENST00000574699 SNAPC4Q5SXM2 1469 aa34.12■■■■□ 3.05
TNFRSF12A-205ENST00000574699 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
TNFRSF12A-205ENST00000574699 GRIN2BQ13224 1484 aa34.11■■■■□ 3.05
TNFRSF12A-205ENST00000574699 PBRM1Q86U86 1689 aa34.09■■■■□ 3.05
TNFRSF12A-205ENST00000574699 FBLN2P98095 1184 aa34.09■■■■□ 3.05
TNFRSF12A-205ENST00000574699 MAGI1Q96QZ7 1491 aaPredicted RBP34.08■■■■□ 3.05
TNFRSF12A-205ENST00000574699 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
TNFRSF12A-205ENST00000574699 TRIM41Q8WV44 630 aa34.08■■■■□ 3.05
TNFRSF12A-205ENST00000574699 GAPVD1Q14C86 1478 aa34.05■■■■□ 3.04
TNFRSF12A-205ENST00000574699 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
TNFRSF12A-205ENST00000574699 RIMBP3CA6NJZ7 1639 aa34.04■■■■□ 3.04
TNFRSF12A-205ENST00000574699 RIMBP3BA6NNM3 1639 aa34.04■■■■□ 3.04
TNFRSF12A-205ENST00000574699 RIMBP3Q9UFD9 1639 aa34.04■■■■□ 3.04
TNFRSF12A-205ENST00000574699 ARHGEF11O15085 1522 aa33.97■■■■□ 3.03
TNFRSF12A-205ENST00000574699 SYNJ2O15056 1496 aa33.95■■■■□ 3.02
TNFRSF12A-205ENST00000574699 CHMP7Q8WUX9 453 aaPredicted RBP33.93■■■■□ 3.02
TNFRSF12A-205ENST00000574699 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
TNFRSF12A-205ENST00000574699 ADAMTS12P58397 1594 aa33.75■■■□□ 2.99
TNFRSF12A-205ENST00000574699 ERICH3Q5RHP9 1530 aa33.72■■■□□ 2.99
TNFRSF12A-205ENST00000574699 GRIN2AQ12879 1464 aa33.68■■■□□ 2.98
TNFRSF12A-205ENST00000574699 ARAP1Q96P48 1450 aa33.64■■■□□ 2.98
TNFRSF12A-205ENST00000574699 FHAD1B1AJZ9 1412 aa33.64■■■□□ 2.98
TNFRSF12A-205ENST00000574699 CYB5RLQ6IPT4 315 aa33.62■■■□□ 2.97
TNFRSF12A-205ENST00000574699 CEP170Q5SW79 1584 aa33.53■■■□□ 2.96
TNFRSF12A-205ENST00000574699 NUP160Q12769 1436 aa33.52■■■□□ 2.96
TNFRSF12A-205ENST00000574699 KIF27Q86VH2 1401 aa33.45■■■□□ 2.95
TNFRSF12A-205ENST00000574699 CUL7Q14999 1698 aa33.38■■■□□ 2.93
TNFRSF12A-205ENST00000574699 SHROOM2Q13796 1616 aa33.36■■■□□ 2.93
TNFRSF12A-205ENST00000574699 IGF1RP08069 1367 aa33.32■■■□□ 2.92
TNFRSF12A-205ENST00000574699 ERCC6L2Q5T890 1561 aa33.29■■■□□ 2.92
TNFRSF12A-205ENST00000574699 RUSC2Q8N2Y8 1516 aa33.27■■■□□ 2.92
TNFRSF12A-205ENST00000574699 PRG4Q92954 1404 aaPredicted RBP33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms