RNA–Protein interactions for RNA: ENST00000573001.5

TNFRSF12A-204, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3 BASIC

Gene TNFRSF12A, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-204ENST00000573001 SEC61GP60059 68 aa4.17□□□□□ -1.74
TNFRSF12A-204ENST00000573001 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
TNFRSF12A-204ENST00000573001 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
TNFRSF12A-204ENST00000573001 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
TNFRSF12A-204ENST00000573001 SERP1Q9Y6X1 66 aa4.16□□□□□ -1.74
TNFRSF12A-204ENST00000573001 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
TNFRSF12A-204ENST00000573001 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
TNFRSF12A-204ENST00000573001 COA5Q86WW8 74 aa4.13□□□□□ -1.75
TNFRSF12A-204ENST00000573001 A0A1B0GU33 70 aa4.11□□□□□ -1.75
TNFRSF12A-204ENST00000573001 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
TNFRSF12A-204ENST00000573001 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
TNFRSF12A-204ENST00000573001 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
TNFRSF12A-204ENST00000573001 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
TNFRSF12A-204ENST00000573001 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
TNFRSF12A-204ENST00000573001 TNP1P09430 55 aa4.05□□□□□ -1.76
TNFRSF12A-204ENST00000573001 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
TNFRSF12A-204ENST00000573001 ATP5EP56381 51 aaPredicted RBP4.01□□□□□ -1.77
TNFRSF12A-204ENST00000573001 TMEM258P61165 79 aa4□□□□□ -1.77
TNFRSF12A-204ENST00000573001 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
TNFRSF12A-204ENST00000573001 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
TNFRSF12A-204ENST00000573001 A8MU10 97 aa3.94□□□□□ -1.78
TNFRSF12A-204ENST00000573001 A0A1B0GU69 56 aa3.93□□□□□ -1.78
TNFRSF12A-204ENST00000573001 PCP4P48539 62 aa3.92□□□□□ -1.78
TNFRSF12A-204ENST00000573001 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
TNFRSF12A-204ENST00000573001 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
TNFRSF12A-204ENST00000573001 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
TNFRSF12A-204ENST00000573001 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
TNFRSF12A-204ENST00000573001 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
TNFRSF12A-204ENST00000573001 PSPHP1O15172 72 aa3.74□□□□□ -1.81
TNFRSF12A-204ENST00000573001 V9GYY9 64 aa3.73□□□□□ -1.81
TNFRSF12A-204ENST00000573001 Q1T7F1 81 aa3.72□□□□□ -1.81
TNFRSF12A-204ENST00000573001 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
TNFRSF12A-204ENST00000573001 UQCR11O14957 56 aa3.71□□□□□ -1.82
TNFRSF12A-204ENST00000573001 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
TNFRSF12A-204ENST00000573001 RPS28P62857 69 aaKnown RBP3.7□□□□□ -1.82
TNFRSF12A-204ENST00000573001 MT1AP04731 61 aa3.69□□□□□ -1.82
TNFRSF12A-204ENST00000573001 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
TNFRSF12A-204ENST00000573001 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
TNFRSF12A-204ENST00000573001 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
TNFRSF12A-204ENST00000573001 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
TNFRSF12A-204ENST00000573001 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
TNFRSF12A-204ENST00000573001 A6NED7 52 aa3.61□□□□□ -1.83
TNFRSF12A-204ENST00000573001 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
TNFRSF12A-204ENST00000573001 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
TNFRSF12A-204ENST00000573001 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
TNFRSF12A-204ENST00000573001 K7ERS5 55 aa3.55□□□□□ -1.84
TNFRSF12A-204ENST00000573001 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
TNFRSF12A-204ENST00000573001 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
TNFRSF12A-204ENST00000573001 MT3P25713 68 aa3.39□□□□□ -1.87
TNFRSF12A-204ENST00000573001 ROMO1P60602 79 aa3.35□□□□□ -1.87
TNFRSF12A-204ENST00000573001 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
TNFRSF12A-204ENST00000573001 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
TNFRSF12A-204ENST00000573001 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
TNFRSF12A-204ENST00000573001 H3BS24 57 aa3.2□□□□□ -1.9
TNFRSF12A-204ENST00000573001 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
TNFRSF12A-204ENST00000573001 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
TNFRSF12A-204ENST00000573001 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
TNFRSF12A-204ENST00000573001 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
TNFRSF12A-204ENST00000573001 PRAC1Q96KF2 57 aa3.02□□□□□ -1.93
TNFRSF12A-204ENST00000573001 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
TNFRSF12A-204ENST00000573001 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
TNFRSF12A-204ENST00000573001 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
TNFRSF12A-204ENST00000573001 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
TNFRSF12A-204ENST00000573001 SVIPQ8NHG7 77 aa2.8□□□□□ -1.96
TNFRSF12A-204ENST00000573001 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
TNFRSF12A-204ENST00000573001 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
TNFRSF12A-204ENST00000573001 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
TNFRSF12A-204ENST00000573001 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
TNFRSF12A-204ENST00000573001 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
TNFRSF12A-204ENST00000573001 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
TNFRSF12A-204ENST00000573001 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
TNFRSF12A-204ENST00000573001 A0A0A0MQY5 61 aa2.26□□□□□ -2.05
TNFRSF12A-204ENST00000573001 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
TNFRSF12A-204ENST00000573001 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
TNFRSF12A-204ENST00000573001 INE1O15225 51 aa1.77□□□□□ -2.13
TNFRSF12A-204ENST00000573001 PRM1P04553 51 aa1.75□□□□□ -2.13
TNFRSF12A-204ENST00000573001 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms