RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
CHMP6-202ENST00000571457 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
CHMP6-202ENST00000571457 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
CHMP6-202ENST00000571457 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
CHMP6-202ENST00000571457 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CHMP6-202ENST00000571457 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
CHMP6-202ENST00000571457 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
CHMP6-202ENST00000571457 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
CHMP6-202ENST00000571457 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
CHMP6-202ENST00000571457 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
CHMP6-202ENST00000571457 TNP1P09430 55 aa3.66□□□□□ -1.82
CHMP6-202ENST00000571457 SEC61GP60059 68 aa3.66□□□□□ -1.82
CHMP6-202ENST00000571457 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
CHMP6-202ENST00000571457 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.83
CHMP6-202ENST00000571457 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
CHMP6-202ENST00000571457 A0A1B0GU33 70 aa3.6□□□□□ -1.83
CHMP6-202ENST00000571457 SMIM20Q8N5G0 67 aa3.59□□□□□ -1.83
CHMP6-202ENST00000571457 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
CHMP6-202ENST00000571457 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
CHMP6-202ENST00000571457 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
CHMP6-202ENST00000571457 SNURFQ9Y675 71 aa3.53□□□□□ -1.84
CHMP6-202ENST00000571457 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
CHMP6-202ENST00000571457 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
CHMP6-202ENST00000571457 SERP2Q8N6R1 65 aa3.51□□□□□ -1.85
CHMP6-202ENST00000571457 ANAPC13Q9BS18 74 aa3.51□□□□□ -1.85
CHMP6-202ENST00000571457 COA5Q86WW8 74 aa3.49□□□□□ -1.85
CHMP6-202ENST00000571457 COX7CP15954 63 aa3.47□□□□□ -1.85
CHMP6-202ENST00000571457 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
CHMP6-202ENST00000571457 A8MU10 97 aa3.43□□□□□ -1.86
CHMP6-202ENST00000571457 PCP4P48539 62 aa3.4□□□□□ -1.87
CHMP6-202ENST00000571457 H7BZZ5 65 aa3.38□□□□□ -1.87
CHMP6-202ENST00000571457 MT1AP04731 61 aa3.38□□□□□ -1.87
CHMP6-202ENST00000571457 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
CHMP6-202ENST00000571457 A0A1B0GU69 56 aa3.35□□□□□ -1.87
CHMP6-202ENST00000571457 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
CHMP6-202ENST00000571457 TMEM258P61165 79 aa3.3□□□□□ -1.88
CHMP6-202ENST00000571457 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
CHMP6-202ENST00000571457 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
CHMP6-202ENST00000571457 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
CHMP6-202ENST00000571457 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
CHMP6-202ENST00000571457 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CHMP6-202ENST00000571457 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
CHMP6-202ENST00000571457 MT3P25713 68 aa3.14□□□□□ -1.91
CHMP6-202ENST00000571457 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
CHMP6-202ENST00000571457 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
CHMP6-202ENST00000571457 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
CHMP6-202ENST00000571457 PSPHP1O15172 72 aa3.04□□□□□ -1.92
CHMP6-202ENST00000571457 Q1T7F1 81 aa3.04□□□□□ -1.92
CHMP6-202ENST00000571457 UQCR11O14957 56 aa3.02□□□□□ -1.93
CHMP6-202ENST00000571457 V9GYY9 64 aa3.01□□□□□ -1.93
CHMP6-202ENST00000571457 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CHMP6-202ENST00000571457 K7ERS5 55 aa2.98□□□□□ -1.93
CHMP6-202ENST00000571457 A6NED7 52 aa2.93□□□□□ -1.94
CHMP6-202ENST00000571457 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
CHMP6-202ENST00000571457 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
CHMP6-202ENST00000571457 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
CHMP6-202ENST00000571457 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
CHMP6-202ENST00000571457 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CHMP6-202ENST00000571457 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
CHMP6-202ENST00000571457 ROMO1P60602 79 aa2.66□□□□□ -1.98
CHMP6-202ENST00000571457 PRAC1Q96KF2 57 aa2.66□□□□□ -1.98
CHMP6-202ENST00000571457 PMAIP1Q13794 54 aa2.64□□□□□ -1.99
CHMP6-202ENST00000571457 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
CHMP6-202ENST00000571457 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
CHMP6-202ENST00000571457 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
CHMP6-202ENST00000571457 PHGR1C9JFL3 82 aa2.53□□□□□ -2
CHMP6-202ENST00000571457 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CHMP6-202ENST00000571457 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
CHMP6-202ENST00000571457 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
CHMP6-202ENST00000571457 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
CHMP6-202ENST00000571457 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
CHMP6-202ENST00000571457 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CHMP6-202ENST00000571457 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
CHMP6-202ENST00000571457 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
CHMP6-202ENST00000571457 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
CHMP6-202ENST00000571457 INE1O15225 51 aa1.54□□□□□ -2.16
CHMP6-202ENST00000571457 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
CHMP6-202ENST00000571457 PRM1P04553 51 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 181.9 ms