RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
HERPUD1-217ENST00000569429 PLAC4Q8WY50 150 aa2.53□□□□□ -2
HERPUD1-217ENST00000569429 A8MUN3 132 aa2.52□□□□□ -2.01
HERPUD1-217ENST00000569429 CHKB-CPT1BH3BT56 60 aa2.52□□□□□ -2.01
HERPUD1-217ENST00000569429 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
HERPUD1-217ENST00000569429 S4R3F8 94 aa2.52□□□□□ -2.01
HERPUD1-217ENST00000569429 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
HERPUD1-217ENST00000569429 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
HERPUD1-217ENST00000569429 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
HERPUD1-217ENST00000569429 PRO0628Q9UI54 55 aa2.47□□□□□ -2.01
HERPUD1-217ENST00000569429 PSPHP1O15172 72 aa2.46□□□□□ -2.02
HERPUD1-217ENST00000569429 MT1EP04732 61 aa2.46□□□□□ -2.02
HERPUD1-217ENST00000569429 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.02
HERPUD1-217ENST00000569429 BRK1Q8WUW1 75 aa2.46□□□□□ -2.02
HERPUD1-217ENST00000569429 MT1GP13640 62 aa2.45□□□□□ -2.02
HERPUD1-217ENST00000569429 A0A1B0GU69 56 aa2.44□□□□□ -2.02
HERPUD1-217ENST00000569429 H0YAA0 97 aa2.44□□□□□ -2.02
HERPUD1-217ENST00000569429 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
HERPUD1-217ENST00000569429 A6NED7 52 aa2.43□□□□□ -2.02
HERPUD1-217ENST00000569429 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
HERPUD1-217ENST00000569429 CDC42SE1Q9NRR8 79 aa2.41□□□□□ -2.02
HERPUD1-217ENST00000569429 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-217ENST00000569429 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.03
HERPUD1-217ENST00000569429 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
HERPUD1-217ENST00000569429 UQCR11O14957 56 aa2.39□□□□□ -2.03
HERPUD1-217ENST00000569429 MT1MQ8N339 61 aa2.38□□□□□ -2.03
HERPUD1-217ENST00000569429 MT3P25713 68 aa2.36□□□□□ -2.03
HERPUD1-217ENST00000569429 MIR22HGQ0VDD5 57 aa2.35□□□□□ -2.03
HERPUD1-217ENST00000569429 PMAIP1Q13794 54 aa2.35□□□□□ -2.03
HERPUD1-217ENST00000569429 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
HERPUD1-217ENST00000569429 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
HERPUD1-217ENST00000569429 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
HERPUD1-217ENST00000569429 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
HERPUD1-217ENST00000569429 R4GN34 69 aa2.33□□□□□ -2.04
HERPUD1-217ENST00000569429 A0A1B0GU33 70 aa2.32□□□□□ -2.04
HERPUD1-217ENST00000569429 M0QZ58 72 aa2.32□□□□□ -2.04
HERPUD1-217ENST00000569429 LINC01554Q52M75 96 aa2.32□□□□□ -2.04
HERPUD1-217ENST00000569429 P0C880 135 aa2.31□□□□□ -2.04
HERPUD1-217ENST00000569429 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
HERPUD1-217ENST00000569429 K7ERS5 55 aa2.3□□□□□ -2.04
HERPUD1-217ENST00000569429 A8MU10 97 aa2.28□□□□□ -2.04
HERPUD1-217ENST00000569429 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
HERPUD1-217ENST00000569429 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
HERPUD1-217ENST00000569429 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-217ENST00000569429 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
HERPUD1-217ENST00000569429 MT1LQ93083 61 aa2.24□□□□□ -2.05
HERPUD1-217ENST00000569429 A0A0D9SG42 100 aa2.23□□□□□ -2.05
HERPUD1-217ENST00000569429 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
HERPUD1-217ENST00000569429 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
HERPUD1-217ENST00000569429 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
HERPUD1-217ENST00000569429 ROMO1P60602 79 aa2.16□□□□□ -2.06
HERPUD1-217ENST00000569429 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
HERPUD1-217ENST00000569429 KRTAP25-1Q3LHN0 102 aa2.1□□□□□ -2.07
HERPUD1-217ENST00000569429 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
HERPUD1-217ENST00000569429 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
HERPUD1-217ENST00000569429 TNP1P09430 55 aa2.03□□□□□ -2.08
HERPUD1-217ENST00000569429 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
HERPUD1-217ENST00000569429 C10orf95Q9H7T3 257 aa2.01□□□□□ -2.09
HERPUD1-217ENST00000569429 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
HERPUD1-217ENST00000569429 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
HERPUD1-217ENST00000569429 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
HERPUD1-217ENST00000569429 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
HERPUD1-217ENST00000569429 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
HERPUD1-217ENST00000569429 MT1AP04731 61 aa1.91□□□□□ -2.1
HERPUD1-217ENST00000569429 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
HERPUD1-217ENST00000569429 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
HERPUD1-217ENST00000569429 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
HERPUD1-217ENST00000569429 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
HERPUD1-217ENST00000569429 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
HERPUD1-217ENST00000569429 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
HERPUD1-217ENST00000569429 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
HERPUD1-217ENST00000569429 INE1O15225 51 aa1.53□□□□□ -2.16
HERPUD1-217ENST00000569429 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
HERPUD1-217ENST00000569429 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
HERPUD1-217ENST00000569429 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
HERPUD1-217ENST00000569429 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
HERPUD1-217ENST00000569429 PRM1P04553 51 aa1.1□□□□□ -2.23
HERPUD1-217ENST00000569429 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 14 ms