RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
PKD1-236ENST00000568796 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
PKD1-236ENST00000568796 V9GYY9 64 aa5.41□□□□□ -1.54
PKD1-236ENST00000568796 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
PKD1-236ENST00000568796 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
PKD1-236ENST00000568796 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
PKD1-236ENST00000568796 A0A1B0GU33 70 aa5.37□□□□□ -1.55
PKD1-236ENST00000568796 Q1T7F1 81 aa5.37□□□□□ -1.55
PKD1-236ENST00000568796 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
PKD1-236ENST00000568796 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
PKD1-236ENST00000568796 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
PKD1-236ENST00000568796 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
PKD1-236ENST00000568796 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
PKD1-236ENST00000568796 PSPHP1O15172 72 aa5.25□□□□□ -1.57
PKD1-236ENST00000568796 UQCR11O14957 56 aa5.24□□□□□ -1.57
PKD1-236ENST00000568796 TNP1P09430 55 aa5.2□□□□□ -1.58
PKD1-236ENST00000568796 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
PKD1-236ENST00000568796 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
PKD1-236ENST00000568796 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
PKD1-236ENST00000568796 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
PKD1-236ENST00000568796 A8MU10 97 aa5.14□□□□□ -1.59
PKD1-236ENST00000568796 A6NED7 52 aa5.1□□□□□ -1.59
PKD1-236ENST00000568796 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
PKD1-236ENST00000568796 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PKD1-236ENST00000568796 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
PKD1-236ENST00000568796 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
PKD1-236ENST00000568796 K7ERS5 55 aa4.99□□□□□ -1.61
PKD1-236ENST00000568796 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
PKD1-236ENST00000568796 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
PKD1-236ENST00000568796 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
PKD1-236ENST00000568796 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
PKD1-236ENST00000568796 ROMO1P60602 79 aa4.72□□□□□ -1.65
PKD1-236ENST00000568796 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
PKD1-236ENST00000568796 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
PKD1-236ENST00000568796 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
PKD1-236ENST00000568796 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
PKD1-236ENST00000568796 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
PKD1-236ENST00000568796 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
PKD1-236ENST00000568796 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
PKD1-236ENST00000568796 MT1AP04731 61 aa4.62□□□□□ -1.67
PKD1-236ENST00000568796 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
PKD1-236ENST00000568796 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
PKD1-236ENST00000568796 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
PKD1-236ENST00000568796 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
PKD1-236ENST00000568796 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
PKD1-236ENST00000568796 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
PKD1-236ENST00000568796 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
PKD1-236ENST00000568796 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
PKD1-236ENST00000568796 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
PKD1-236ENST00000568796 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
PKD1-236ENST00000568796 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
PKD1-236ENST00000568796 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
PKD1-236ENST00000568796 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
PKD1-236ENST00000568796 MT3P25713 68 aa4.25□□□□□ -1.73
PKD1-236ENST00000568796 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
PKD1-236ENST00000568796 SVIPQ8NHG7 77 aa4.08□□□□□ -1.76
PKD1-236ENST00000568796 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
PKD1-236ENST00000568796 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
PKD1-236ENST00000568796 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
PKD1-236ENST00000568796 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
PKD1-236ENST00000568796 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
PKD1-236ENST00000568796 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
PKD1-236ENST00000568796 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
PKD1-236ENST00000568796 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
PKD1-236ENST00000568796 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
PKD1-236ENST00000568796 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
PKD1-236ENST00000568796 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
PKD1-236ENST00000568796 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
PKD1-236ENST00000568796 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
PKD1-236ENST00000568796 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
PKD1-236ENST00000568796 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
PKD1-236ENST00000568796 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PKD1-236ENST00000568796 INE1O15225 51 aa2.83□□□□□ -1.96
PKD1-236ENST00000568796 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
PKD1-236ENST00000568796 H3BS24 57 aa2.74□□□□□ -1.97
PKD1-236ENST00000568796 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
PKD1-236ENST00000568796 PRM1P04553 51 aa2.42□□□□□ -2.02
PKD1-236ENST00000568796 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms