RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MT1MQ8N339 61 aa2.9□□□□□ -1.95
HDGFL3-205ENST00000568129 Q1T7F1 81 aa2.89□□□□□ -1.95
HDGFL3-205ENST00000568129 V9GYY9 64 aa2.87□□□□□ -1.95
HDGFL3-205ENST00000568129 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
HDGFL3-205ENST00000568129 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP23-1A1A580 65 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 PSPHP1O15172 72 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
HDGFL3-205ENST00000568129 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
HDGFL3-205ENST00000568129 KRTAP4-9Q9BYQ8 210 aa2.78□□□□□ -1.96
HDGFL3-205ENST00000568129 K7ERS5 55 aa2.77□□□□□ -1.97
HDGFL3-205ENST00000568129 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
HDGFL3-205ENST00000568129 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
HDGFL3-205ENST00000568129 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
HDGFL3-205ENST00000568129 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
HDGFL3-205ENST00000568129 A6NED7 52 aa2.7□□□□□ -1.98
HDGFL3-205ENST00000568129 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
HDGFL3-205ENST00000568129 MT4P47944 62 aa2.69□□□□□ -1.98
HDGFL3-205ENST00000568129 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
HDGFL3-205ENST00000568129 PCP4P48539 62 aa2.67□□□□□ -1.98
HDGFL3-205ENST00000568129 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
HDGFL3-205ENST00000568129 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
HDGFL3-205ENST00000568129 CDC42SE1Q9NRR8 79 aa2.64□□□□□ -1.99
HDGFL3-205ENST00000568129 ROMO1P60602 79 aa2.63□□□□□ -1.99
HDGFL3-205ENST00000568129 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
HDGFL3-205ENST00000568129 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
HDGFL3-205ENST00000568129 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
HDGFL3-205ENST00000568129 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
HDGFL3-205ENST00000568129 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
HDGFL3-205ENST00000568129 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
HDGFL3-205ENST00000568129 KRTAP12-4P60329 112 aa2.56□□□□□ -2
HDGFL3-205ENST00000568129 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
HDGFL3-205ENST00000568129 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
HDGFL3-205ENST00000568129 MT1AP04731 61 aa2.49□□□□□ -2.01
HDGFL3-205ENST00000568129 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
HDGFL3-205ENST00000568129 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
HDGFL3-205ENST00000568129 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
HDGFL3-205ENST00000568129 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
HDGFL3-205ENST00000568129 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
HDGFL3-205ENST00000568129 BRK1Q8WUW1 75 aa2.32□□□□□ -2.04
HDGFL3-205ENST00000568129 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
HDGFL3-205ENST00000568129 MT3P25713 68 aa2.27□□□□□ -2.05
HDGFL3-205ENST00000568129 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
HDGFL3-205ENST00000568129 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
HDGFL3-205ENST00000568129 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
HDGFL3-205ENST00000568129 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-205ENST00000568129 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
HDGFL3-205ENST00000568129 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
HDGFL3-205ENST00000568129 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
HDGFL3-205ENST00000568129 H3BS24 57 aa2.11□□□□□ -2.07
HDGFL3-205ENST00000568129 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
HDGFL3-205ENST00000568129 PRO0628Q9UI54 55 aa2.08□□□□□ -2.08
HDGFL3-205ENST00000568129 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
HDGFL3-205ENST00000568129 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
HDGFL3-205ENST00000568129 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
HDGFL3-205ENST00000568129 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
HDGFL3-205ENST00000568129 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
HDGFL3-205ENST00000568129 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
HDGFL3-205ENST00000568129 SVIPQ8NHG7 77 aa1.79□□□□□ -2.12
HDGFL3-205ENST00000568129 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
HDGFL3-205ENST00000568129 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
HDGFL3-205ENST00000568129 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
HDGFL3-205ENST00000568129 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
HDGFL3-205ENST00000568129 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
HDGFL3-205ENST00000568129 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
HDGFL3-205ENST00000568129 NDUFAF8A1L188 74 aa1.4□□□□□ -2.19
HDGFL3-205ENST00000568129 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
HDGFL3-205ENST00000568129 PRM1P04553 51 aa1.33□□□□□ -2.2
HDGFL3-205ENST00000568129 INE1O15225 51 aa1.18□□□□□ -2.22
HDGFL3-205ENST00000568129 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
HDGFL3-205ENST00000568129 A0A0A0MQY5 61 aa1.09□□□□□ -2.23
HDGFL3-205ENST00000568129 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 153.7 ms