RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
GSE1-213ENST00000568080 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
GSE1-213ENST00000568080 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
GSE1-213ENST00000568080 PCP4P48539 62 aa5.16□□□□□ -1.58
GSE1-213ENST00000568080 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
GSE1-213ENST00000568080 UQCR11O14957 56 aa5.11□□□□□ -1.59
GSE1-213ENST00000568080 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
GSE1-213ENST00000568080 TMEM258P61165 79 aa5.06□□□□□ -1.6
GSE1-213ENST00000568080 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
GSE1-213ENST00000568080 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
GSE1-213ENST00000568080 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
GSE1-213ENST00000568080 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
GSE1-213ENST00000568080 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
GSE1-213ENST00000568080 K7ERS5 55 aa4.96□□□□□ -1.62
GSE1-213ENST00000568080 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
GSE1-213ENST00000568080 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
GSE1-213ENST00000568080 PSPHP1O15172 72 aa4.84□□□□□ -1.63
GSE1-213ENST00000568080 V9GYY9 64 aa4.84□□□□□ -1.63
GSE1-213ENST00000568080 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
GSE1-213ENST00000568080 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
GSE1-213ENST00000568080 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
GSE1-213ENST00000568080 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
GSE1-213ENST00000568080 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
GSE1-213ENST00000568080 Q1T7F1 81 aa4.76□□□□□ -1.65
GSE1-213ENST00000568080 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
GSE1-213ENST00000568080 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
GSE1-213ENST00000568080 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
GSE1-213ENST00000568080 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
GSE1-213ENST00000568080 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
GSE1-213ENST00000568080 A6NED7 52 aa4.7□□□□□ -1.66
GSE1-213ENST00000568080 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
GSE1-213ENST00000568080 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
GSE1-213ENST00000568080 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
GSE1-213ENST00000568080 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
GSE1-213ENST00000568080 ROMO1P60602 79 aa4.55□□□□□ -1.68
GSE1-213ENST00000568080 MT1AP04731 61 aa4.48□□□□□ -1.69
GSE1-213ENST00000568080 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
GSE1-213ENST00000568080 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
GSE1-213ENST00000568080 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
GSE1-213ENST00000568080 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
GSE1-213ENST00000568080 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
GSE1-213ENST00000568080 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
GSE1-213ENST00000568080 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
GSE1-213ENST00000568080 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
GSE1-213ENST00000568080 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
GSE1-213ENST00000568080 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
GSE1-213ENST00000568080 MT3P25713 68 aa4.12□□□□□ -1.75
GSE1-213ENST00000568080 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
GSE1-213ENST00000568080 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
GSE1-213ENST00000568080 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
GSE1-213ENST00000568080 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
GSE1-213ENST00000568080 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
GSE1-213ENST00000568080 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
GSE1-213ENST00000568080 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
GSE1-213ENST00000568080 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
GSE1-213ENST00000568080 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
GSE1-213ENST00000568080 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
GSE1-213ENST00000568080 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
GSE1-213ENST00000568080 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
GSE1-213ENST00000568080 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
GSE1-213ENST00000568080 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
GSE1-213ENST00000568080 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
GSE1-213ENST00000568080 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
GSE1-213ENST00000568080 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
GSE1-213ENST00000568080 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
GSE1-213ENST00000568080 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
GSE1-213ENST00000568080 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
GSE1-213ENST00000568080 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
GSE1-213ENST00000568080 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
GSE1-213ENST00000568080 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
GSE1-213ENST00000568080 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
GSE1-213ENST00000568080 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
GSE1-213ENST00000568080 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
GSE1-213ENST00000568080 INE1O15225 51 aa2.56□□□□□ -2
GSE1-213ENST00000568080 H3BS24 57 aa2.44□□□□□ -2.02
GSE1-213ENST00000568080 PRM1P04553 51 aa2.33□□□□□ -2.04
GSE1-213ENST00000568080 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
GSE1-213ENST00000568080 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms