RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MT1HP80294 61 aa1□□□□□ -2.25
CHD9-218ENST00000566029 LCE3BQ5TA77 95 aa0.99□□□□□ -2.25
CHD9-218ENST00000566029 MT1LQ93083 61 aa0.99□□□□□ -2.25
CHD9-218ENST00000566029 PRM1P04553 51 aa0.99□□□□□ -2.25
CHD9-218ENST00000566029 KRTAP4-5Q9BYR2 181 aa0.98□□□□□ -2.25
CHD9-218ENST00000566029 LRP2P98164 4655 aa0.97□□□□□ -2.25
CHD9-218ENST00000566029 KRTAP19-6Q3LI70 58 aa0.97□□□□□ -2.25
CHD9-218ENST00000566029 MT1AP04731 61 aa0.96□□□□□ -2.26
CHD9-218ENST00000566029 LCE3EQ5T5B0 92 aa0.96□□□□□ -2.26
CHD9-218ENST00000566029 MT1MQ8N339 61 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 KRTAP9-8Q9BYQ0 159 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 SPRR2DP22532 72 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 KRTAP9-3Q9BYQ3 159 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 LCE1FQ5T754 118 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 MDN1Q9NU22 5596 aa0.95□□□□□ -2.26
CHD9-218ENST00000566029 LCE5AQ5TCM9 118 aa0.94□□□□□ -2.26
CHD9-218ENST00000566029 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
CHD9-218ENST00000566029 KRTAP4-7Q9BYR0 210 aa0.94□□□□□ -2.26
CHD9-218ENST00000566029 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
CHD9-218ENST00000566029 MUC5BQ9HC84 5762 aaPredicted RBP0.94□□□□□ -2.26
CHD9-218ENST00000566029 KRTAP6-3Q3LI67 103 aa0.93□□□□□ -2.26
CHD9-218ENST00000566029 LCE3DQ9BYE3 92 aa0.93□□□□□ -2.26
CHD9-218ENST00000566029 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
CHD9-218ENST00000566029 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
CHD9-218ENST00000566029 LCE1EQ5T753 118 aa0.9□□□□□ -2.26
CHD9-218ENST00000566029 SPRR2EP22531 72 aa0.9□□□□□ -2.27
CHD9-218ENST00000566029 LRP1Q07954 4544 aaKnown RBP0.89□□□□□ -2.27
CHD9-218ENST00000566029 FCGBPQ9Y6R7 5405 aaPredicted RBP0.89□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP5-5Q701N2 237 aaPredicted RBP0.89□□□□□ -2.27
CHD9-218ENST00000566029 NEBP20929 6669 aa0.87□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP4-8Q9BYQ9 185 aa0.87□□□□□ -2.27
CHD9-218ENST00000566029 KMT2DO14686 5537 aa0.87□□□□□ -2.27
CHD9-218ENST00000566029 OBSCNQ5VST9 7968 aa0.87□□□□□ -2.27
CHD9-218ENST00000566029 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
CHD9-218ENST00000566029 LPAP08519 4548 aa0.87□□□□□ -2.27
CHD9-218ENST00000566029 MUC17Q685J3 4493 aa0.86□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP4-8A0A0G2JLE6 195 aa0.86□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP4-9Q9BYQ8 210 aa0.86□□□□□ -2.27
CHD9-218ENST00000566029 LOC100996750A0A140TA64 210 aa0.85□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP4-3Q9BYR4 195 aa0.85□□□□□ -2.27
CHD9-218ENST00000566029 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP4-6Q9BYQ5 205 aa0.84□□□□□ -2.27
CHD9-218ENST00000566029 KRTAP4-12Q9BQ66 201 aa0.83□□□□□ -2.28
CHD9-218ENST00000566029 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
CHD9-218ENST00000566029 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
CHD9-218ENST00000566029 KRTAP20-1Q3LI63 56 aa0.82□□□□□ -2.28
CHD9-218ENST00000566029 KRTAP5-9P26371 169 aa0.82□□□□□ -2.28
CHD9-218ENST00000566029 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
CHD9-218ENST00000566029 LCE1DQ5T752 114 aa0.82□□□□□ -2.28
CHD9-218ENST00000566029 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
CHD9-218ENST00000566029 KRTAP4-2Q9BYR5 136 aa0.81□□□□□ -2.28
CHD9-218ENST00000566029 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
CHD9-218ENST00000566029 HMCN1Q96RW7 5635 aa0.8□□□□□ -2.28
CHD9-218ENST00000566029 MT4P47944 62 aa0.78□□□□□ -2.28
CHD9-218ENST00000566029 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.29
CHD9-218ENST00000566029 LCE1BQ5T7P3 118 aa0.77□□□□□ -2.29
CHD9-218ENST00000566029 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
CHD9-218ENST00000566029 KRTAP5-3Q6L8H2 238 aa0.76□□□□□ -2.29
CHD9-218ENST00000566029 KRTAP4-11Q9BYQ6 195 aa0.76□□□□□ -2.29
CHD9-218ENST00000566029 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
CHD9-218ENST00000566029 LCE1CQ5T751 118 aa0.72□□□□□ -2.29
CHD9-218ENST00000566029 KRTAP5-4Q6L8H1 288 aa0.69□□□□□ -2.3
CHD9-218ENST00000566029 KRTAP4-4Q9BYR3 166 aa0.66□□□□□ -2.3
CHD9-218ENST00000566029 KRTAP5-11Q6L8G4 156 aa0.64□□□□□ -2.31
CHD9-218ENST00000566029 MUC19Q7Z5P9 8384 aa0.64□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP5-2Q701N4 177 aa0.64□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP5-8O75690 187 aa0.63□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.6□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP5-1Q6L8H4 278 aa0.6□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
CHD9-218ENST00000566029 KRTAP5-7Q6L8G8 165 aa0.59□□□□□ -2.31
CHD9-218ENST00000566029 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
CHD9-218ENST00000566029 KRTAP21-2Q3LI59 83 aa0.5□□□□□ -2.33
CHD9-218ENST00000566029 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 100 ms