RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 TNP1P09430 55 aa4.52□□□□□ -1.69
HERC2-206ENST00000564519 PCP4P48539 62 aa4.52□□□□□ -1.69
HERC2-206ENST00000564519 Q1T7F1 81 aa4.52□□□□□ -1.69
HERC2-206ENST00000564519 MT1LQ93083 61 aa4.52□□□□□ -1.69
HERC2-206ENST00000564519 MT4P47944 62 aa4.51□□□□□ -1.69
HERC2-206ENST00000564519 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
HERC2-206ENST00000564519 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
HERC2-206ENST00000564519 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
HERC2-206ENST00000564519 MT1MQ8N339 61 aa4.5□□□□□ -1.69
HERC2-206ENST00000564519 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
HERC2-206ENST00000564519 PSPHP1O15172 72 aa4.47□□□□□ -1.69
HERC2-206ENST00000564519 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
HERC2-206ENST00000564519 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
HERC2-206ENST00000564519 A6NED7 52 aa4.41□□□□□ -1.7
HERC2-206ENST00000564519 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
HERC2-206ENST00000564519 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
HERC2-206ENST00000564519 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
HERC2-206ENST00000564519 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
HERC2-206ENST00000564519 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
HERC2-206ENST00000564519 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
HERC2-206ENST00000564519 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
HERC2-206ENST00000564519 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
HERC2-206ENST00000564519 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
HERC2-206ENST00000564519 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HERC2-206ENST00000564519 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
HERC2-206ENST00000564519 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
HERC2-206ENST00000564519 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
HERC2-206ENST00000564519 ROMO1P60602 79 aa4.13□□□□□ -1.75
HERC2-206ENST00000564519 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
HERC2-206ENST00000564519 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
HERC2-206ENST00000564519 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
HERC2-206ENST00000564519 SVIPQ8NHG7 77 aa4.06□□□□□ -1.76
HERC2-206ENST00000564519 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
HERC2-206ENST00000564519 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
HERC2-206ENST00000564519 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
HERC2-206ENST00000564519 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
HERC2-206ENST00000564519 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
HERC2-206ENST00000564519 H3BS24 57 aa3.88□□□□□ -1.79
HERC2-206ENST00000564519 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
HERC2-206ENST00000564519 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
HERC2-206ENST00000564519 MT1AP04731 61 aa3.83□□□□□ -1.8
HERC2-206ENST00000564519 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
HERC2-206ENST00000564519 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
HERC2-206ENST00000564519 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
HERC2-206ENST00000564519 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
HERC2-206ENST00000564519 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
HERC2-206ENST00000564519 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
HERC2-206ENST00000564519 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
HERC2-206ENST00000564519 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
HERC2-206ENST00000564519 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
HERC2-206ENST00000564519 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
HERC2-206ENST00000564519 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
HERC2-206ENST00000564519 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
HERC2-206ENST00000564519 MT3P25713 68 aa3.49□□□□□ -1.85
HERC2-206ENST00000564519 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
HERC2-206ENST00000564519 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
HERC2-206ENST00000564519 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
HERC2-206ENST00000564519 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
HERC2-206ENST00000564519 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
HERC2-206ENST00000564519 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
HERC2-206ENST00000564519 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
HERC2-206ENST00000564519 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
HERC2-206ENST00000564519 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
HERC2-206ENST00000564519 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
HERC2-206ENST00000564519 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
HERC2-206ENST00000564519 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
HERC2-206ENST00000564519 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
HERC2-206ENST00000564519 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
HERC2-206ENST00000564519 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
HERC2-206ENST00000564519 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
HERC2-206ENST00000564519 NDUFAF8A1L188 74 aa2.53□□□□□ -2
HERC2-206ENST00000564519 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
HERC2-206ENST00000564519 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
HERC2-206ENST00000564519 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
HERC2-206ENST00000564519 INE1O15225 51 aa2.15□□□□□ -2.07
HERC2-206ENST00000564519 PRM1P04553 51 aa2.08□□□□□ -2.08
HERC2-206ENST00000564519 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
HERC2-206ENST00000564519 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 74.8 ms