RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
HERPUD1-205ENST00000562914 MT1LQ93083 61 aa5.56□□□□□ -1.52
HERPUD1-205ENST00000562914 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
HERPUD1-205ENST00000562914 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
HERPUD1-205ENST00000562914 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
HERPUD1-205ENST00000562914 PCP4P48539 62 aa5.5□□□□□ -1.53
HERPUD1-205ENST00000562914 A8MU10 97 aa5.47□□□□□ -1.53
HERPUD1-205ENST00000562914 UQCR11O14957 56 aa5.46□□□□□ -1.54
HERPUD1-205ENST00000562914 V9GYY9 64 aa5.46□□□□□ -1.54
HERPUD1-205ENST00000562914 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
HERPUD1-205ENST00000562914 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
HERPUD1-205ENST00000562914 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
HERPUD1-205ENST00000562914 Q1T7F1 81 aa5.37□□□□□ -1.55
HERPUD1-205ENST00000562914 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
HERPUD1-205ENST00000562914 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
HERPUD1-205ENST00000562914 PSPHP1O15172 72 aa5.32□□□□□ -1.56
HERPUD1-205ENST00000562914 TNP1P09430 55 aa5.31□□□□□ -1.56
HERPUD1-205ENST00000562914 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
HERPUD1-205ENST00000562914 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
HERPUD1-205ENST00000562914 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-205ENST00000562914 K7ERS5 55 aa5.27□□□□□ -1.57
HERPUD1-205ENST00000562914 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
HERPUD1-205ENST00000562914 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
HERPUD1-205ENST00000562914 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
HERPUD1-205ENST00000562914 A6NED7 52 aa5.19□□□□□ -1.58
HERPUD1-205ENST00000562914 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
HERPUD1-205ENST00000562914 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
HERPUD1-205ENST00000562914 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
HERPUD1-205ENST00000562914 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
HERPUD1-205ENST00000562914 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
HERPUD1-205ENST00000562914 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
HERPUD1-205ENST00000562914 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
HERPUD1-205ENST00000562914 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
HERPUD1-205ENST00000562914 ROMO1P60602 79 aa4.88□□□□□ -1.63
HERPUD1-205ENST00000562914 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
HERPUD1-205ENST00000562914 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
HERPUD1-205ENST00000562914 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
HERPUD1-205ENST00000562914 MT1AP04731 61 aa4.74□□□□□ -1.65
HERPUD1-205ENST00000562914 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
HERPUD1-205ENST00000562914 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-205ENST00000562914 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
HERPUD1-205ENST00000562914 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
HERPUD1-205ENST00000562914 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
HERPUD1-205ENST00000562914 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
HERPUD1-205ENST00000562914 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
HERPUD1-205ENST00000562914 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
HERPUD1-205ENST00000562914 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
HERPUD1-205ENST00000562914 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
HERPUD1-205ENST00000562914 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
HERPUD1-205ENST00000562914 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
HERPUD1-205ENST00000562914 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
HERPUD1-205ENST00000562914 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
HERPUD1-205ENST00000562914 MT3P25713 68 aa4.38□□□□□ -1.71
HERPUD1-205ENST00000562914 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
HERPUD1-205ENST00000562914 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
HERPUD1-205ENST00000562914 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
HERPUD1-205ENST00000562914 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
HERPUD1-205ENST00000562914 SVIPQ8NHG7 77 aa4□□□□□ -1.77
HERPUD1-205ENST00000562914 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
HERPUD1-205ENST00000562914 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
HERPUD1-205ENST00000562914 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
HERPUD1-205ENST00000562914 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
HERPUD1-205ENST00000562914 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
HERPUD1-205ENST00000562914 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
HERPUD1-205ENST00000562914 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-205ENST00000562914 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
HERPUD1-205ENST00000562914 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
HERPUD1-205ENST00000562914 H3BS24 57 aa3.31□□□□□ -1.88
HERPUD1-205ENST00000562914 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
HERPUD1-205ENST00000562914 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
HERPUD1-205ENST00000562914 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
HERPUD1-205ENST00000562914 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
HERPUD1-205ENST00000562914 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
HERPUD1-205ENST00000562914 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
HERPUD1-205ENST00000562914 INE1O15225 51 aa2.67□□□□□ -1.98
HERPUD1-205ENST00000562914 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
HERPUD1-205ENST00000562914 PRM1P04553 51 aa2.49□□□□□ -2.01
HERPUD1-205ENST00000562914 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms