RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 Q1T7F1 81 aa4.64□□□□□ -1.67
SMAD3-213ENST00000560175 V9GYY9 64 aa4.63□□□□□ -1.67
SMAD3-213ENST00000560175 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SMAD3-213ENST00000560175 PSPHP1O15172 72 aa4.56□□□□□ -1.68
SMAD3-213ENST00000560175 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
SMAD3-213ENST00000560175 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
SMAD3-213ENST00000560175 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
SMAD3-213ENST00000560175 K7ERS5 55 aa4.51□□□□□ -1.69
SMAD3-213ENST00000560175 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
SMAD3-213ENST00000560175 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
SMAD3-213ENST00000560175 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
SMAD3-213ENST00000560175 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
SMAD3-213ENST00000560175 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
SMAD3-213ENST00000560175 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
SMAD3-213ENST00000560175 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
SMAD3-213ENST00000560175 PCP4P48539 62 aa4.41□□□□□ -1.7
SMAD3-213ENST00000560175 A6NED7 52 aa4.39□□□□□ -1.71
SMAD3-213ENST00000560175 MT4P47944 62 aa4.38□□□□□ -1.71
SMAD3-213ENST00000560175 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
SMAD3-213ENST00000560175 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
SMAD3-213ENST00000560175 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
SMAD3-213ENST00000560175 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
SMAD3-213ENST00000560175 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SMAD3-213ENST00000560175 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
SMAD3-213ENST00000560175 ROMO1P60602 79 aa4.26□□□□□ -1.73
SMAD3-213ENST00000560175 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SMAD3-213ENST00000560175 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
SMAD3-213ENST00000560175 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
SMAD3-213ENST00000560175 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
SMAD3-213ENST00000560175 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
SMAD3-213ENST00000560175 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
SMAD3-213ENST00000560175 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
SMAD3-213ENST00000560175 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
SMAD3-213ENST00000560175 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
SMAD3-213ENST00000560175 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SMAD3-213ENST00000560175 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SMAD3-213ENST00000560175 MT1AP04731 61 aa4.01□□□□□ -1.77
SMAD3-213ENST00000560175 H3BS24 57 aa3.99□□□□□ -1.77
SMAD3-213ENST00000560175 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
SMAD3-213ENST00000560175 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
SMAD3-213ENST00000560175 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
SMAD3-213ENST00000560175 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
SMAD3-213ENST00000560175 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SMAD3-213ENST00000560175 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
SMAD3-213ENST00000560175 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
SMAD3-213ENST00000560175 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
SMAD3-213ENST00000560175 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
SMAD3-213ENST00000560175 MT3P25713 68 aa3.66□□□□□ -1.82
SMAD3-213ENST00000560175 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
SMAD3-213ENST00000560175 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
SMAD3-213ENST00000560175 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SMAD3-213ENST00000560175 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
SMAD3-213ENST00000560175 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SMAD3-213ENST00000560175 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
SMAD3-213ENST00000560175 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
SMAD3-213ENST00000560175 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SMAD3-213ENST00000560175 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
SMAD3-213ENST00000560175 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
SMAD3-213ENST00000560175 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
SMAD3-213ENST00000560175 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SMAD3-213ENST00000560175 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
SMAD3-213ENST00000560175 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
SMAD3-213ENST00000560175 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
SMAD3-213ENST00000560175 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
SMAD3-213ENST00000560175 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
SMAD3-213ENST00000560175 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
SMAD3-213ENST00000560175 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
SMAD3-213ENST00000560175 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SMAD3-213ENST00000560175 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SMAD3-213ENST00000560175 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
SMAD3-213ENST00000560175 NDUFAF8A1L188 74 aa2.55□□□□□ -2
SMAD3-213ENST00000560175 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SMAD3-213ENST00000560175 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
SMAD3-213ENST00000560175 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SMAD3-213ENST00000560175 INE1O15225 51 aa2.24□□□□□ -2.05
SMAD3-213ENST00000560175 PRM1P04553 51 aa2.16□□□□□ -2.06
SMAD3-213ENST00000560175 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SMAD3-213ENST00000560175 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 115.1 ms