RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 PKD1P98161 4303 aa1.07□□□□□ -2.24
CRNDE-208ENST00000560029 FAT2Q9NYQ8 4349 aa1.06□□□□□ -2.24
CRNDE-208ENST00000560029 KRTAP2-3P0C7H8 128 aa1.06□□□□□ -2.24
CRNDE-208ENST00000560029 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
CRNDE-208ENST00000560029 KRTAP2-4Q9BYR9 128 aa1.06□□□□□ -2.24
CRNDE-208ENST00000560029 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
CRNDE-208ENST00000560029 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
CRNDE-208ENST00000560029 FLGP20930 4061 aaPredicted RBP1.05□□□□□ -2.24
CRNDE-208ENST00000560029 FAT3Q8TDW7 4589 aa1.05□□□□□ -2.24
CRNDE-208ENST00000560029 DYNC1H1Q14204 4646 aaKnown RBP1.05□□□□□ -2.24
CRNDE-208ENST00000560029 HSPG2P98160 4391 aa1.05□□□□□ -2.24
CRNDE-208ENST00000560029 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
CRNDE-208ENST00000560029 FAT1Q14517 4588 aa1.02□□□□□ -2.25
CRNDE-208ENST00000560029 KRTAP19-2Q3LHN2 52 aa1.01□□□□□ -2.25
CRNDE-208ENST00000560029 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
CRNDE-208ENST00000560029 MT1XP80297 61 aa0.98□□□□□ -2.25
CRNDE-208ENST00000560029 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
CRNDE-208ENST00000560029 HERC1Q15751 4861 aa0.95□□□□□ -2.26
CRNDE-208ENST00000560029 MT2AP02795 61 aa0.93□□□□□ -2.26
CRNDE-208ENST00000560029 MT1FP04733 61 aa0.93□□□□□ -2.26
CRNDE-208ENST00000560029 MT1BP07438 61 aa0.93□□□□□ -2.26
CRNDE-208ENST00000560029 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
CRNDE-208ENST00000560029 PRM1P04553 51 aa0.92□□□□□ -2.26
CRNDE-208ENST00000560029 LPAP08519 4548 aa0.92□□□□□ -2.26
CRNDE-208ENST00000560029 DNHD1Q96M86 4753 aa0.92□□□□□ -2.26
CRNDE-208ENST00000560029 HYDINQ4G0P3 5121 aa0.9□□□□□ -2.26
CRNDE-208ENST00000560029 MT1HP80294 61 aa0.89□□□□□ -2.27
CRNDE-208ENST00000560029 MT1EP04732 61 aa0.88□□□□□ -2.27
CRNDE-208ENST00000560029 MT1LQ93083 61 aa0.88□□□□□ -2.27
CRNDE-208ENST00000560029 LRP2P98164 4655 aa0.87□□□□□ -2.27
CRNDE-208ENST00000560029 MT1AP04731 61 aa0.87□□□□□ -2.27
CRNDE-208ENST00000560029 MT1GP13640 62 aa0.85□□□□□ -2.27
CRNDE-208ENST00000560029 KRTAP19-7Q3SYF9 63 aa0.85□□□□□ -2.27
CRNDE-208ENST00000560029 KMT2CQ8NEZ4 4911 aaKnown RBP0.84□□□□□ -2.28
CRNDE-208ENST00000560029 HMCN2Q8NDA2 5059 aa0.83□□□□□ -2.28
CRNDE-208ENST00000560029 RYR2Q92736 4967 aa0.82□□□□□ -2.28
CRNDE-208ENST00000560029 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
CRNDE-208ENST00000560029 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
CRNDE-208ENST00000560029 MUC2Q02817 5179 aa0.8□□□□□ -2.28
CRNDE-208ENST00000560029 MT1MQ8N339 61 aa0.79□□□□□ -2.28
CRNDE-208ENST00000560029 SPRR2AP35326 72 aa0.78□□□□□ -2.28
CRNDE-208ENST00000560029 RYR1P21817 5038 aa0.78□□□□□ -2.28
CRNDE-208ENST00000560029 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
CRNDE-208ENST00000560029 RYR3Q15413 4870 aa0.76□□□□□ -2.29
CRNDE-208ENST00000560029 SPRR2BP35325 72 aa0.76□□□□□ -2.29
CRNDE-208ENST00000560029 HERC2O95714 4834 aa0.75□□□□□ -2.29
CRNDE-208ENST00000560029 SPRR2EP22531 72 aa0.74□□□□□ -2.29
CRNDE-208ENST00000560029 SPRR2DP22532 72 aa0.74□□□□□ -2.29
CRNDE-208ENST00000560029 PCLOQ9Y6V0 5065 aa0.74□□□□□ -2.29
CRNDE-208ENST00000560029 BIRC6Q9NR09 4857 aa0.73□□□□□ -2.29
CRNDE-208ENST00000560029 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
CRNDE-208ENST00000560029 ABCA13Q86UQ4 5058 aa0.72□□□□□ -2.29
CRNDE-208ENST00000560029 UBR4Q5T4S7 5183 aa0.72□□□□□ -2.29
CRNDE-208ENST00000560029 KIAA1109Q2LD37 5005 aa0.69□□□□□ -2.3
CRNDE-208ENST00000560029 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
CRNDE-208ENST00000560029 EPPK1P58107 5090 aaKnown RBP0.67□□□□□ -2.3
CRNDE-208ENST00000560029 KRTAP19-6Q3LI70 58 aa0.64□□□□□ -2.31
CRNDE-208ENST00000560029 RNF213Q63HN8 5207 aa0.61□□□□□ -2.31
CRNDE-208ENST00000560029 KMT2DO14686 5537 aa0.61□□□□□ -2.31
CRNDE-208ENST00000560029 FAT4Q6V0I7 4981 aa0.6□□□□□ -2.31
CRNDE-208ENST00000560029 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
CRNDE-208ENST00000560029 SSPOA2VEC9 5147 aa0.59□□□□□ -2.32
CRNDE-208ENST00000560029 USH2AO75445 5202 aa0.59□□□□□ -2.32
CRNDE-208ENST00000560029 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
CRNDE-208ENST00000560029 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
CRNDE-208ENST00000560029 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
CRNDE-208ENST00000560029 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
CRNDE-208ENST00000560029 MT4P47944 62 aa0.46□□□□□ -2.34
CRNDE-208ENST00000560029 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
CRNDE-208ENST00000560029 KRTAP20-2Q3LI61 65 aa0.45□□□□□ -2.34
CRNDE-208ENST00000560029 MUC12Q9UKN1 5478 aa0.44□□□□□ -2.34
CRNDE-208ENST00000560029 DSTQ03001 7570 aaKnown RBP0.41□□□□□ -2.34
CRNDE-208ENST00000560029 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
CRNDE-208ENST00000560029 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
CRNDE-208ENST00000560029 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
CRNDE-208ENST00000560029 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
CRNDE-208ENST00000560029 NEBP20929 6669 aa0.2□□□□□ -2.38
CRNDE-208ENST00000560029 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms