RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
PABPN1-208ENST00000557702 A6NED7 52 aa3.47□□□□□ -1.85
PABPN1-208ENST00000557702 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
PABPN1-208ENST00000557702 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
PABPN1-208ENST00000557702 MT1GP13640 62 aa3.46□□□□□ -1.86
PABPN1-208ENST00000557702 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
PABPN1-208ENST00000557702 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
PABPN1-208ENST00000557702 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
PABPN1-208ENST00000557702 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
PABPN1-208ENST00000557702 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
PABPN1-208ENST00000557702 A0A0D9SG42 100 aa3.4□□□□□ -1.87
PABPN1-208ENST00000557702 A8MU10 97 aa3.4□□□□□ -1.87
PABPN1-208ENST00000557702 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
PABPN1-208ENST00000557702 MT1MQ8N339 61 aa3.37□□□□□ -1.87
PABPN1-208ENST00000557702 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
PABPN1-208ENST00000557702 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
PABPN1-208ENST00000557702 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
PABPN1-208ENST00000557702 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
PABPN1-208ENST00000557702 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
PABPN1-208ENST00000557702 K7ERS5 55 aa3.31□□□□□ -1.88
PABPN1-208ENST00000557702 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
PABPN1-208ENST00000557702 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
PABPN1-208ENST00000557702 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
PABPN1-208ENST00000557702 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
PABPN1-208ENST00000557702 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
PABPN1-208ENST00000557702 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
PABPN1-208ENST00000557702 MT1LQ93083 61 aa3.24□□□□□ -1.89
PABPN1-208ENST00000557702 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
PABPN1-208ENST00000557702 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
PABPN1-208ENST00000557702 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
PABPN1-208ENST00000557702 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
PABPN1-208ENST00000557702 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
PABPN1-208ENST00000557702 ROMO1P60602 79 aa3.16□□□□□ -1.9
PABPN1-208ENST00000557702 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
PABPN1-208ENST00000557702 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
PABPN1-208ENST00000557702 TNP1P09430 55 aa3.09□□□□□ -1.91
PABPN1-208ENST00000557702 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
PABPN1-208ENST00000557702 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
PABPN1-208ENST00000557702 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
PABPN1-208ENST00000557702 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
PABPN1-208ENST00000557702 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
PABPN1-208ENST00000557702 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
PABPN1-208ENST00000557702 H3BS24 57 aa2.98□□□□□ -1.93
PABPN1-208ENST00000557702 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
PABPN1-208ENST00000557702 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
PABPN1-208ENST00000557702 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
PABPN1-208ENST00000557702 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
PABPN1-208ENST00000557702 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
PABPN1-208ENST00000557702 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
PABPN1-208ENST00000557702 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
PABPN1-208ENST00000557702 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
PABPN1-208ENST00000557702 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
PABPN1-208ENST00000557702 MT1AP04731 61 aa2.75□□□□□ -1.97
PABPN1-208ENST00000557702 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
PABPN1-208ENST00000557702 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
PABPN1-208ENST00000557702 MT3P25713 68 aa2.57□□□□□ -2
PABPN1-208ENST00000557702 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
PABPN1-208ENST00000557702 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
PABPN1-208ENST00000557702 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
PABPN1-208ENST00000557702 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
PABPN1-208ENST00000557702 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
PABPN1-208ENST00000557702 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
PABPN1-208ENST00000557702 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
PABPN1-208ENST00000557702 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
PABPN1-208ENST00000557702 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
PABPN1-208ENST00000557702 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
PABPN1-208ENST00000557702 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
PABPN1-208ENST00000557702 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
PABPN1-208ENST00000557702 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
PABPN1-208ENST00000557702 INE1O15225 51 aa1.93□□□□□ -2.1
PABPN1-208ENST00000557702 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
PABPN1-208ENST00000557702 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
PABPN1-208ENST00000557702 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
PABPN1-208ENST00000557702 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
PABPN1-208ENST00000557702 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
PABPN1-208ENST00000557702 PRM1P04553 51 aa1.64□□□□□ -2.15
PABPN1-208ENST00000557702 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 66.2 ms