RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 COA5Q86WW8 74 aa4.27□□□□□ -1.73
SNX6-209ENST00000557265 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
SNX6-209ENST00000557265 H7BZZ5 65 aa4.21□□□□□ -1.74
SNX6-209ENST00000557265 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
SNX6-209ENST00000557265 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
SNX6-209ENST00000557265 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
SNX6-209ENST00000557265 SPATA8Q6RVD6 105 aa4.17□□□□□ -1.74
SNX6-209ENST00000557265 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.75
SNX6-209ENST00000557265 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
SNX6-209ENST00000557265 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
SNX6-209ENST00000557265 SERP1Q9Y6X1 66 aa4.12□□□□□ -1.75
SNX6-209ENST00000557265 CCDC179H3BU77 68 aa4.11□□□□□ -1.75
SNX6-209ENST00000557265 SEC61GP60059 68 aa4.11□□□□□ -1.75
SNX6-209ENST00000557265 A0A1B0GU33 70 aa4.08□□□□□ -1.76
SNX6-209ENST00000557265 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SNX6-209ENST00000557265 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SNX6-209ENST00000557265 TNP1P09430 55 aa4.04□□□□□ -1.76
SNX6-209ENST00000557265 A0A1B0GU69 56 aa4.02□□□□□ -1.77
SNX6-209ENST00000557265 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
SNX6-209ENST00000557265 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
SNX6-209ENST00000557265 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
SNX6-209ENST00000557265 A8MU10 97 aa3.97□□□□□ -1.77
SNX6-209ENST00000557265 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
SNX6-209ENST00000557265 TMEM258P61165 79 aa3.91□□□□□ -1.78
SNX6-209ENST00000557265 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
SNX6-209ENST00000557265 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
SNX6-209ENST00000557265 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
SNX6-209ENST00000557265 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
SNX6-209ENST00000557265 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
SNX6-209ENST00000557265 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
SNX6-209ENST00000557265 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
SNX6-209ENST00000557265 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
SNX6-209ENST00000557265 UQCR11O14957 56 aa3.77□□□□□ -1.81
SNX6-209ENST00000557265 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
SNX6-209ENST00000557265 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SNX6-209ENST00000557265 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
SNX6-209ENST00000557265 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SNX6-209ENST00000557265 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SNX6-209ENST00000557265 MT1AP04731 61 aa3.68□□□□□ -1.82
SNX6-209ENST00000557265 Q1T7F1 81 aa3.65□□□□□ -1.83
SNX6-209ENST00000557265 V9GYY9 64 aa3.64□□□□□ -1.83
SNX6-209ENST00000557265 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
SNX6-209ENST00000557265 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SNX6-209ENST00000557265 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
SNX6-209ENST00000557265 K7ERS5 55 aa3.59□□□□□ -1.83
SNX6-209ENST00000557265 A6NED7 52 aa3.56□□□□□ -1.84
SNX6-209ENST00000557265 PCP4P48539 62 aa3.53□□□□□ -1.84
SNX6-209ENST00000557265 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
SNX6-209ENST00000557265 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
SNX6-209ENST00000557265 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
SNX6-209ENST00000557265 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
SNX6-209ENST00000557265 MT3P25713 68 aa3.39□□□□□ -1.87
SNX6-209ENST00000557265 ROMO1P60602 79 aa3.39□□□□□ -1.87
SNX6-209ENST00000557265 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
SNX6-209ENST00000557265 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SNX6-209ENST00000557265 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
SNX6-209ENST00000557265 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
SNX6-209ENST00000557265 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
SNX6-209ENST00000557265 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SNX6-209ENST00000557265 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
SNX6-209ENST00000557265 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SNX6-209ENST00000557265 PRAC1Q96KF2 57 aa2.86□□□□□ -1.95
SNX6-209ENST00000557265 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SNX6-209ENST00000557265 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SNX6-209ENST00000557265 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
SNX6-209ENST00000557265 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SNX6-209ENST00000557265 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
SNX6-209ENST00000557265 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
SNX6-209ENST00000557265 A0A0A0MQY5 61 aa2.54□□□□□ -2
SNX6-209ENST00000557265 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SNX6-209ENST00000557265 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SNX6-209ENST00000557265 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
SNX6-209ENST00000557265 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SNX6-209ENST00000557265 NDUFAF8A1L188 74 aa2.07□□□□□ -2.08
SNX6-209ENST00000557265 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SNX6-209ENST00000557265 PRM1P04553 51 aa1.77□□□□□ -2.13
SNX6-209ENST00000557265 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
SNX6-209ENST00000557265 INE1O15225 51 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 100.3 ms