RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 V9GYY9 64 aa6.35□□□□□ -1.39
XRCC3-217ENST00000556980 PSPHP1O15172 72 aa6.32□□□□□ -1.4
XRCC3-217ENST00000556980 K7ERS5 55 aa6.31□□□□□ -1.4
XRCC3-217ENST00000556980 Q1T7F1 81 aa6.28□□□□□ -1.4
XRCC3-217ENST00000556980 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
XRCC3-217ENST00000556980 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
XRCC3-217ENST00000556980 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
XRCC3-217ENST00000556980 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
XRCC3-217ENST00000556980 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
XRCC3-217ENST00000556980 A6NED7 52 aa6.12□□□□□ -1.43
XRCC3-217ENST00000556980 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
XRCC3-217ENST00000556980 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
XRCC3-217ENST00000556980 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
XRCC3-217ENST00000556980 MT4P47944 62 aa6.07□□□□□ -1.44
XRCC3-217ENST00000556980 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
XRCC3-217ENST00000556980 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
XRCC3-217ENST00000556980 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
XRCC3-217ENST00000556980 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
XRCC3-217ENST00000556980 PCP4P48539 62 aa5.96□□□□□ -1.46
XRCC3-217ENST00000556980 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
XRCC3-217ENST00000556980 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
XRCC3-217ENST00000556980 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
XRCC3-217ENST00000556980 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
XRCC3-217ENST00000556980 ROMO1P60602 79 aa5.86□□□□□ -1.47
XRCC3-217ENST00000556980 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
XRCC3-217ENST00000556980 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
XRCC3-217ENST00000556980 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
XRCC3-217ENST00000556980 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
XRCC3-217ENST00000556980 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
XRCC3-217ENST00000556980 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
XRCC3-217ENST00000556980 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
XRCC3-217ENST00000556980 KRTAP5-10Q6L8G5 202 aa5.62□□□□□ -1.51
XRCC3-217ENST00000556980 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
XRCC3-217ENST00000556980 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
XRCC3-217ENST00000556980 MT1AP04731 61 aa5.45□□□□□ -1.54
XRCC3-217ENST00000556980 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
XRCC3-217ENST00000556980 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
XRCC3-217ENST00000556980 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
XRCC3-217ENST00000556980 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
XRCC3-217ENST00000556980 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
XRCC3-217ENST00000556980 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
XRCC3-217ENST00000556980 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
XRCC3-217ENST00000556980 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
XRCC3-217ENST00000556980 MT3P25713 68 aa4.99□□□□□ -1.61
XRCC3-217ENST00000556980 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
XRCC3-217ENST00000556980 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
XRCC3-217ENST00000556980 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
XRCC3-217ENST00000556980 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
XRCC3-217ENST00000556980 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
XRCC3-217ENST00000556980 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
XRCC3-217ENST00000556980 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
XRCC3-217ENST00000556980 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
XRCC3-217ENST00000556980 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
XRCC3-217ENST00000556980 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
XRCC3-217ENST00000556980 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
XRCC3-217ENST00000556980 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
XRCC3-217ENST00000556980 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
XRCC3-217ENST00000556980 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
XRCC3-217ENST00000556980 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
XRCC3-217ENST00000556980 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
XRCC3-217ENST00000556980 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
XRCC3-217ENST00000556980 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
XRCC3-217ENST00000556980 H3BS24 57 aa3.93□□□□□ -1.78
XRCC3-217ENST00000556980 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
XRCC3-217ENST00000556980 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
XRCC3-217ENST00000556980 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
XRCC3-217ENST00000556980 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
XRCC3-217ENST00000556980 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
XRCC3-217ENST00000556980 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
XRCC3-217ENST00000556980 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
XRCC3-217ENST00000556980 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
XRCC3-217ENST00000556980 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
XRCC3-217ENST00000556980 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
XRCC3-217ENST00000556980 PRM1P04553 51 aa2.99□□□□□ -1.93
XRCC3-217ENST00000556980 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
XRCC3-217ENST00000556980 INE1O15225 51 aa2.6□□□□□ -1.99
XRCC3-217ENST00000556980 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
XRCC3-217ENST00000556980 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms