RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TNP1P09430 55 aa4.55□□□□□ -1.68
SRP54-206ENST00000555317 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
SRP54-206ENST00000555317 PSPHP1O15172 72 aa4.52□□□□□ -1.69
SRP54-206ENST00000555317 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
SRP54-206ENST00000555317 K7ERS5 55 aa4.51□□□□□ -1.69
SRP54-206ENST00000555317 Q1T7F1 81 aa4.51□□□□□ -1.69
SRP54-206ENST00000555317 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
SRP54-206ENST00000555317 MT1EP04732 61 aa4.49□□□□□ -1.69
SRP54-206ENST00000555317 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SRP54-206ENST00000555317 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
SRP54-206ENST00000555317 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
SRP54-206ENST00000555317 PCP4P48539 62 aa4.44□□□□□ -1.7
SRP54-206ENST00000555317 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
SRP54-206ENST00000555317 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
SRP54-206ENST00000555317 A6NED7 52 aa4.41□□□□□ -1.7
SRP54-206ENST00000555317 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
SRP54-206ENST00000555317 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
SRP54-206ENST00000555317 MT1GP13640 62 aa4.35□□□□□ -1.71
SRP54-206ENST00000555317 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
SRP54-206ENST00000555317 MT1LQ93083 61 aa4.31□□□□□ -1.72
SRP54-206ENST00000555317 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SRP54-206ENST00000555317 MT1MQ8N339 61 aa4.27□□□□□ -1.73
SRP54-206ENST00000555317 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
SRP54-206ENST00000555317 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
SRP54-206ENST00000555317 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
SRP54-206ENST00000555317 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
SRP54-206ENST00000555317 ROMO1P60602 79 aa4.16□□□□□ -1.74
SRP54-206ENST00000555317 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
SRP54-206ENST00000555317 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
SRP54-206ENST00000555317 MT4P47944 62 aa4.02□□□□□ -1.77
SRP54-206ENST00000555317 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
SRP54-206ENST00000555317 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
SRP54-206ENST00000555317 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SRP54-206ENST00000555317 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
SRP54-206ENST00000555317 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
SRP54-206ENST00000555317 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
SRP54-206ENST00000555317 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
SRP54-206ENST00000555317 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
SRP54-206ENST00000555317 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
SRP54-206ENST00000555317 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SRP54-206ENST00000555317 MT1AP04731 61 aa3.68□□□□□ -1.82
SRP54-206ENST00000555317 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
SRP54-206ENST00000555317 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
SRP54-206ENST00000555317 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
SRP54-206ENST00000555317 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
SRP54-206ENST00000555317 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
SRP54-206ENST00000555317 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
SRP54-206ENST00000555317 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
SRP54-206ENST00000555317 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
SRP54-206ENST00000555317 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
SRP54-206ENST00000555317 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
SRP54-206ENST00000555317 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
SRP54-206ENST00000555317 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
SRP54-206ENST00000555317 MT3P25713 68 aa3.38□□□□□ -1.87
SRP54-206ENST00000555317 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
SRP54-206ENST00000555317 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SRP54-206ENST00000555317 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
SRP54-206ENST00000555317 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
SRP54-206ENST00000555317 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
SRP54-206ENST00000555317 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SRP54-206ENST00000555317 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
SRP54-206ENST00000555317 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
SRP54-206ENST00000555317 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SRP54-206ENST00000555317 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
SRP54-206ENST00000555317 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SRP54-206ENST00000555317 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
SRP54-206ENST00000555317 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
SRP54-206ENST00000555317 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
SRP54-206ENST00000555317 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SRP54-206ENST00000555317 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
SRP54-206ENST00000555317 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
SRP54-206ENST00000555317 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
SRP54-206ENST00000555317 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SRP54-206ENST00000555317 PRM1P04553 51 aa2.12□□□□□ -2.07
SRP54-206ENST00000555317 INE1O15225 51 aa2.01□□□□□ -2.09
SRP54-206ENST00000555317 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SRP54-206ENST00000555317 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SRP54-206ENST00000555317 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 313.6 ms