RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
LINC00871-201ENST00000555246 R4GN34 69 aa2.03□□□□□ -2.08
LINC00871-201ENST00000555246 P0C880 135 aa2.01□□□□□ -2.09
LINC00871-201ENST00000555246 M0QZ58 72 aa1.99□□□□□ -2.09
LINC00871-201ENST00000555246 TMEM258P61165 79 aa1.99□□□□□ -2.09
LINC00871-201ENST00000555246 DMAC1Q96GE9 116 aa1.99□□□□□ -2.09
LINC00871-201ENST00000555246 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
LINC00871-201ENST00000555246 ATP5EP56381 51 aaPredicted RBP1.98□□□□□ -2.09
LINC00871-201ENST00000555246 K7ERS5 55 aa1.96□□□□□ -2.1
LINC00871-201ENST00000555246 ACYP2P14621 99 aa1.96□□□□□ -2.1
LINC00871-201ENST00000555246 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
LINC00871-201ENST00000555246 SERP1Q9Y6X1 66 aa1.94□□□□□ -2.1
LINC00871-201ENST00000555246 LINC01554Q52M75 96 aa1.93□□□□□ -2.1
LINC00871-201ENST00000555246 COA5Q86WW8 74 aa1.93□□□□□ -2.1
LINC00871-201ENST00000555246 KTN1-AS1Q86SY8 53 aa1.92□□□□□ -2.1
LINC00871-201ENST00000555246 A6NED7 52 aa1.91□□□□□ -2.1
LINC00871-201ENST00000555246 CHKB-CPT1BH3BT56 60 aa1.9□□□□□ -2.11
LINC00871-201ENST00000555246 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
LINC00871-201ENST00000555246 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
LINC00871-201ENST00000555246 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
LINC00871-201ENST00000555246 MT1EP04732 61 aa1.88□□□□□ -2.11
LINC00871-201ENST00000555246 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
LINC00871-201ENST00000555246 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
LINC00871-201ENST00000555246 KRTAP25-1Q3LHN0 102 aa1.87□□□□□ -2.11
LINC00871-201ENST00000555246 Q1T7F1 81 aa1.86□□□□□ -2.11
LINC00871-201ENST00000555246 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
LINC00871-201ENST00000555246 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
LINC00871-201ENST00000555246 A0A1B0GU33 70 aa1.84□□□□□ -2.11
LINC00871-201ENST00000555246 MT1GP13640 62 aa1.83□□□□□ -2.12
LINC00871-201ENST00000555246 A0A1B0GU69 56 aa1.82□□□□□ -2.12
LINC00871-201ENST00000555246 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
LINC00871-201ENST00000555246 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
LINC00871-201ENST00000555246 PRR15LQ9BU68 103 aa1.81□□□□□ -2.12
LINC00871-201ENST00000555246 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
LINC00871-201ENST00000555246 MT1MQ8N339 61 aa1.79□□□□□ -2.12
LINC00871-201ENST00000555246 KRTAP4-3Q9BYR4 195 aa1.79□□□□□ -2.12
LINC00871-201ENST00000555246 A0A0D9SG42 100 aa1.78□□□□□ -2.12
LINC00871-201ENST00000555246 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
LINC00871-201ENST00000555246 MT1LQ93083 61 aa1.78□□□□□ -2.12
LINC00871-201ENST00000555246 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
LINC00871-201ENST00000555246 UQCR11O14957 56 aa1.77□□□□□ -2.13
LINC00871-201ENST00000555246 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
LINC00871-201ENST00000555246 MT4P47944 62 aa1.76□□□□□ -2.13
LINC00871-201ENST00000555246 SPATA8Q6RVD6 105 aa1.76□□□□□ -2.13
LINC00871-201ENST00000555246 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
LINC00871-201ENST00000555246 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
LINC00871-201ENST00000555246 MIR22HGQ0VDD5 57 aa1.74□□□□□ -2.13
LINC00871-201ENST00000555246 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
LINC00871-201ENST00000555246 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
LINC00871-201ENST00000555246 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
LINC00871-201ENST00000555246 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
LINC00871-201ENST00000555246 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
LINC00871-201ENST00000555246 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
LINC00871-201ENST00000555246 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
LINC00871-201ENST00000555246 TNP1P09430 55 aa1.68□□□□□ -2.14
LINC00871-201ENST00000555246 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
LINC00871-201ENST00000555246 ROMO1P60602 79 aa1.67□□□□□ -2.14
LINC00871-201ENST00000555246 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
LINC00871-201ENST00000555246 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
LINC00871-201ENST00000555246 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
LINC00871-201ENST00000555246 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
LINC00871-201ENST00000555246 MT1AP04731 61 aa1.51□□□□□ -2.17
LINC00871-201ENST00000555246 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
LINC00871-201ENST00000555246 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
LINC00871-201ENST00000555246 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
LINC00871-201ENST00000555246 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
LINC00871-201ENST00000555246 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
LINC00871-201ENST00000555246 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
LINC00871-201ENST00000555246 INE1O15225 51 aa1.41□□□□□ -2.18
LINC00871-201ENST00000555246 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
LINC00871-201ENST00000555246 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
LINC00871-201ENST00000555246 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
LINC00871-201ENST00000555246 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
LINC00871-201ENST00000555246 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
LINC00871-201ENST00000555246 PRM1P04553 51 aa0.82□□□□□ -2.28
LINC00871-201ENST00000555246 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
LINC00871-201ENST00000555246 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 71.5 ms