RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 MT1LQ93083 61 aa9.38□□□□□ -0.91
KTN1-215ENST00000554567 LINC01558Q9Y6Z2 57 aa9.36□□□□□ -0.91
KTN1-215ENST00000554567 KRTAP4-3Q9BYR4 195 aa9.33□□□□□ -0.92
KTN1-215ENST00000554567 KRTAP5-4Q6L8H1 288 aa9.3□□□□□ -0.92
KTN1-215ENST00000554567 KRTAP4-6Q9BYQ5 205 aa9.3□□□□□ -0.92
KTN1-215ENST00000554567 A8MU10 97 aa9.26□□□□□ -0.93
KTN1-215ENST00000554567 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
KTN1-215ENST00000554567 UQCR11O14957 56 aa9.13□□□□□ -0.95
KTN1-215ENST00000554567 LCE3AQ5TA76 89 aa9.12□□□□□ -0.95
KTN1-215ENST00000554567 TNP1P09430 55 aa9.08□□□□□ -0.96
KTN1-215ENST00000554567 KRTAP5-7Q6L8G8 165 aa9.05□□□□□ -0.96
KTN1-215ENST00000554567 KRTAP5-3Q6L8H2 238 aa9.01□□□□□ -0.97
KTN1-215ENST00000554567 KRTAP4-7Q9BYR0 210 aa8.97□□□□□ -0.97
KTN1-215ENST00000554567 V9GYY9 64 aa8.97□□□□□ -0.97
KTN1-215ENST00000554567 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
KTN1-215ENST00000554567 Q1T7F1 81 aa8.85□□□□□ -0.99
KTN1-215ENST00000554567 KRTAP20-2Q3LI61 65 aa8.85□□□□□ -0.99
KTN1-215ENST00000554567 K7ERS5 55 aa8.77□□□□□ -1.01
KTN1-215ENST00000554567 SPRR5A0A1B0GTR4 108 aa8.76□□□□□ -1.01
KTN1-215ENST00000554567 KRTAP12-3P60328 96 aa8.76□□□□□ -1.01
KTN1-215ENST00000554567 KRTAP5-5Q701N2 237 aaPredicted RBP8.7□□□□□ -1.02
KTN1-215ENST00000554567 KRTAP25-1Q3LHN0 102 aa8.69□□□□□ -1.02
KTN1-215ENST00000554567 PSPHP1O15172 72 aa8.68□□□□□ -1.02
KTN1-215ENST00000554567 KRTAP12-4P60329 112 aa8.66□□□□□ -1.02
KTN1-215ENST00000554567 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
KTN1-215ENST00000554567 LOC100996750A0A140TA64 210 aa8.52□□□□□ -1.05
KTN1-215ENST00000554567 KRTAP23-1A1A580 65 aa8.49□□□□□ -1.05
KTN1-215ENST00000554567 A6NED7 52 aa8.46□□□□□ -1.06
KTN1-215ENST00000554567 SYNE1Q8NF91 8797 aaKnown RBP8.44□□□□□ -1.06
KTN1-215ENST00000554567 KRTAP19-4Q3LI73 84 aa8.43□□□□□ -1.06
KTN1-215ENST00000554567 PCP4P48539 62 aa8.35□□□□□ -1.07
KTN1-215ENST00000554567 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
KTN1-215ENST00000554567 KRTAP4-11Q9BYQ6 195 aa8.22□□□□□ -1.09
KTN1-215ENST00000554567 ROMO1P60602 79 aa8.13□□□□□ -1.11
KTN1-215ENST00000554567 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
KTN1-215ENST00000554567 AHNAKQ09666 5890 aaKnown RBP8.08□□□□□ -1.12
KTN1-215ENST00000554567 KRTAP5-2Q701N4 177 aa8.04□□□□□ -1.12
KTN1-215ENST00000554567 MUC5ACP98088 5654 aa8.01□□□□□ -1.13
KTN1-215ENST00000554567 LCE3CQ5T5A8 94 aa8.01□□□□□ -1.13
KTN1-215ENST00000554567 MUC5BQ9HC84 5762 aaPredicted RBP7.98□□□□□ -1.13
KTN1-215ENST00000554567 KRTAP6-1Q3LI64 71 aa7.98□□□□□ -1.13
KTN1-215ENST00000554567 MT1AP04731 61 aa7.96□□□□□ -1.14
KTN1-215ENST00000554567 KRTAP5-8O75690 187 aa7.94□□□□□ -1.14
KTN1-215ENST00000554567 KRTAP9-4Q9BYQ2 154 aa7.77□□□□□ -1.17
KTN1-215ENST00000554567 KRTAP6-2Q3LI66 62 aa7.74□□□□□ -1.17
KTN1-215ENST00000554567 OBSCNQ5VST9 7968 aa7.67□□□□□ -1.18
KTN1-215ENST00000554567 KRTAP9-9Q9BYP9 154 aa7.66□□□□□ -1.18
KTN1-215ENST00000554567 KRTAP9-6A8MVA2 160 aa7.58□□□□□ -1.2
KTN1-215ENST00000554567 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
KTN1-215ENST00000554567 KRTAP5-1Q6L8H4 278 aa7.34□□□□□ -1.23
KTN1-215ENST00000554567 MT3P25713 68 aa7.32□□□□□ -1.24
KTN1-215ENST00000554567 PMAIP1Q13794 54 aa6.96□□□□□ -1.3
KTN1-215ENST00000554567 LCE1EQ5T753 118 aa6.8□□□□□ -1.32
KTN1-215ENST00000554567 LCE1BQ5T7P3 118 aa6.57□□□□□ -1.36
KTN1-215ENST00000554567 PRO0628Q9UI54 55 aa6.56□□□□□ -1.36
KTN1-215ENST00000554567 PRAC1Q96KF2 57 aa6.54□□□□□ -1.36
KTN1-215ENST00000554567 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
KTN1-215ENST00000554567 LCE1CQ5T751 118 aa6.33□□□□□ -1.4
KTN1-215ENST00000554567 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
KTN1-215ENST00000554567 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
KTN1-215ENST00000554567 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
KTN1-215ENST00000554567 KRTAP5-11Q6L8G4 156 aa5.77□□□□□ -1.49
KTN1-215ENST00000554567 LCE3DQ9BYE3 92 aa5.77□□□□□ -1.49
KTN1-215ENST00000554567 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
KTN1-215ENST00000554567 LCE1FQ5T754 118 aa5.72□□□□□ -1.49
KTN1-215ENST00000554567 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.65□□□□□ -1.5
KTN1-215ENST00000554567 PHGR1C9JFL3 82 aa5.51□□□□□ -1.53
KTN1-215ENST00000554567 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
KTN1-215ENST00000554567 KRTAP21-2Q3LI59 83 aa5.24□□□□□ -1.57
KTN1-215ENST00000554567 H3BS24 57 aa5.2□□□□□ -1.58
KTN1-215ENST00000554567 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
KTN1-215ENST00000554567 MUC19Q7Z5P9 8384 aa4.77□□□□□ -1.65
KTN1-215ENST00000554567 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
KTN1-215ENST00000554567 KRTAP21-1Q3LI58 79 aa4.15□□□□□ -1.75
KTN1-215ENST00000554567 PRM1P04553 51 aa4.09□□□□□ -1.75
KTN1-215ENST00000554567 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
KTN1-215ENST00000554567 INE1O15225 51 aa3.8□□□□□ -1.8
KTN1-215ENST00000554567 MUC16Q8WXI7 14507 aa3.35□□□□□ -1.87
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms