RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
CKAP4-203ENST00000553039 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
CKAP4-203ENST00000553039 ACYP2P14621 99 aa2.18□□□□□ -2.06
CKAP4-203ENST00000553039 CHKB-CPT1BH3BT56 60 aa2.17□□□□□ -2.06
CKAP4-203ENST00000553039 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
CKAP4-203ENST00000553039 COA5Q86WW8 74 aa2.17□□□□□ -2.06
CKAP4-203ENST00000553039 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
CKAP4-203ENST00000553039 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
CKAP4-203ENST00000553039 DSTQ03001 7570 aaKnown RBP2.15□□□□□ -2.07
CKAP4-203ENST00000553039 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
CKAP4-203ENST00000553039 Q1T7F1 81 aa2.12□□□□□ -2.07
CKAP4-203ENST00000553039 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
CKAP4-203ENST00000553039 MT4P47944 62 aa2.11□□□□□ -2.07
CKAP4-203ENST00000553039 S4R3F8 94 aa2.1□□□□□ -2.07
CKAP4-203ENST00000553039 MT1XP80297 61 aa2.09□□□□□ -2.07
CKAP4-203ENST00000553039 PRR15LQ9BU68 103 aa2.09□□□□□ -2.07
CKAP4-203ENST00000553039 A0A1B0GU69 56 aa2.08□□□□□ -2.08
CKAP4-203ENST00000553039 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
CKAP4-203ENST00000553039 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
CKAP4-203ENST00000553039 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
CKAP4-203ENST00000553039 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
CKAP4-203ENST00000553039 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
CKAP4-203ENST00000553039 H0YAA0 97 aa2.01□□□□□ -2.09
CKAP4-203ENST00000553039 UQCR11O14957 56 aa2.01□□□□□ -2.09
CKAP4-203ENST00000553039 P0C880 135 aa2.01□□□□□ -2.09
CKAP4-203ENST00000553039 BRK1Q8WUW1 75 aa2.01□□□□□ -2.09
CKAP4-203ENST00000553039 ROMO1P60602 79 aa1.99□□□□□ -2.09
CKAP4-203ENST00000553039 MIR22HGQ0VDD5 57 aa1.99□□□□□ -2.09
CKAP4-203ENST00000553039 KRTAP10-7P60409 375 aaPredicted RBP1.98□□□□□ -2.09
CKAP4-203ENST00000553039 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
CKAP4-203ENST00000553039 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
CKAP4-203ENST00000553039 SPATA8Q6RVD6 105 aa1.97□□□□□ -2.09
CKAP4-203ENST00000553039 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
CKAP4-203ENST00000553039 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
CKAP4-203ENST00000553039 M0QZ58 72 aa1.95□□□□□ -2.1
CKAP4-203ENST00000553039 PP632Q6XCG6 107 aa1.95□□□□□ -2.1
CKAP4-203ENST00000553039 MT1GP13640 62 aa1.94□□□□□ -2.1
CKAP4-203ENST00000553039 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
CKAP4-203ENST00000553039 A0A0D9SG42 100 aa1.91□□□□□ -2.1
CKAP4-203ENST00000553039 MT1EP04732 61 aa1.89□□□□□ -2.11
CKAP4-203ENST00000553039 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
CKAP4-203ENST00000553039 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
CKAP4-203ENST00000553039 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
CKAP4-203ENST00000553039 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
CKAP4-203ENST00000553039 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.11
CKAP4-203ENST00000553039 MT1MQ8N339 61 aa1.82□□□□□ -2.12
CKAP4-203ENST00000553039 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
CKAP4-203ENST00000553039 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CKAP4-203ENST00000553039 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
CKAP4-203ENST00000553039 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CKAP4-203ENST00000553039 KRTAP4-3Q9BYR4 195 aa1.76□□□□□ -2.13
CKAP4-203ENST00000553039 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
CKAP4-203ENST00000553039 MT1LQ93083 61 aa1.75□□□□□ -2.13
CKAP4-203ENST00000553039 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
CKAP4-203ENST00000553039 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
CKAP4-203ENST00000553039 INE1O15225 51 aa1.73□□□□□ -2.13
CKAP4-203ENST00000553039 TNP1P09430 55 aa1.73□□□□□ -2.13
CKAP4-203ENST00000553039 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CKAP4-203ENST00000553039 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
CKAP4-203ENST00000553039 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
CKAP4-203ENST00000553039 LCE3AQ5TA76 89 aa1.63□□□□□ -2.15
CKAP4-203ENST00000553039 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
CKAP4-203ENST00000553039 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
CKAP4-203ENST00000553039 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
CKAP4-203ENST00000553039 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
CKAP4-203ENST00000553039 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
CKAP4-203ENST00000553039 MT1AP04731 61 aa1.49□□□□□ -2.17
CKAP4-203ENST00000553039 KRTAP6-1Q3LI64 71 aa1.48□□□□□ -2.17
CKAP4-203ENST00000553039 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
CKAP4-203ENST00000553039 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
CKAP4-203ENST00000553039 LCE1BQ5T7P3 118 aa1.35□□□□□ -2.19
CKAP4-203ENST00000553039 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
CKAP4-203ENST00000553039 KRTAP4-4Q9BYR3 166 aa1.18□□□□□ -2.22
CKAP4-203ENST00000553039 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
CKAP4-203ENST00000553039 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
CKAP4-203ENST00000553039 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
CKAP4-203ENST00000553039 PRM1P04553 51 aa0.94□□□□□ -2.26
CKAP4-203ENST00000553039 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 86 ms