RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ACYP2P14621 99 aa4.46□□□□□ -1.7
VPS29-209ENST00000551655 ATP5EP2Q5VTU8 51 aa4.45□□□□□ -1.7
VPS29-209ENST00000551655 H3BPC8 53 aa4.4□□□□□ -1.71
VPS29-209ENST00000551655 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
VPS29-209ENST00000551655 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
VPS29-209ENST00000551655 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
VPS29-209ENST00000551655 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
VPS29-209ENST00000551655 KRTAP4-4Q9BYR3 166 aa4.36□□□□□ -1.71
VPS29-209ENST00000551655 MT3P25713 68 aa4.35□□□□□ -1.71
VPS29-209ENST00000551655 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
VPS29-209ENST00000551655 SMIM6P0DI80 62 aa4.32□□□□□ -1.72
VPS29-209ENST00000551655 TNP1P09430 55 aa4.3□□□□□ -1.72
VPS29-209ENST00000551655 F8W1H4 67 aa4.29□□□□□ -1.72
VPS29-209ENST00000551655 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
VPS29-209ENST00000551655 MT1AP04731 61 aa4.25□□□□□ -1.73
VPS29-209ENST00000551655 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
VPS29-209ENST00000551655 PCP4P48539 62 aa4.23□□□□□ -1.73
VPS29-209ENST00000551655 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
VPS29-209ENST00000551655 COL5A1-AS1Q5SY13 56 aa4.21□□□□□ -1.74
VPS29-209ENST00000551655 GTF2H5Q6ZYL4 71 aa4.21□□□□□ -1.74
VPS29-209ENST00000551655 LINC00643Q86TS7 51 aa4.21□□□□□ -1.74
VPS29-209ENST00000551655 SCGB1A1P11684 91 aa4.11□□□□□ -1.75
VPS29-209ENST00000551655 A0A1B0GU33 70 aa4.1□□□□□ -1.75
VPS29-209ENST00000551655 A8MU10 97 aa4.08□□□□□ -1.76
VPS29-209ENST00000551655 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
VPS29-209ENST00000551655 SEC61GP60059 68 aa4.04□□□□□ -1.76
VPS29-209ENST00000551655 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
VPS29-209ENST00000551655 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
VPS29-209ENST00000551655 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
VPS29-209ENST00000551655 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
VPS29-209ENST00000551655 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
VPS29-209ENST00000551655 COA5Q86WW8 74 aa3.91□□□□□ -1.78
VPS29-209ENST00000551655 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
VPS29-209ENST00000551655 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
VPS29-209ENST00000551655 LOC105371267A0A1B0GV96 52 aa3.82□□□□□ -1.8
VPS29-209ENST00000551655 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
VPS29-209ENST00000551655 SMIM20Q8N5G0 67 aa3.73□□□□□ -1.81
VPS29-209ENST00000551655 A0A1B0GU69 56 aa3.7□□□□□ -1.82
VPS29-209ENST00000551655 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
VPS29-209ENST00000551655 PCP4L1A6NKN8 68 aa3.62□□□□□ -1.83
VPS29-209ENST00000551655 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
VPS29-209ENST00000551655 J3QR89 54 aa3.49□□□□□ -1.85
VPS29-209ENST00000551655 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
VPS29-209ENST00000551655 H7BZZ5 65 aa3.43□□□□□ -1.86
VPS29-209ENST00000551655 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
VPS29-209ENST00000551655 PRR15LQ9BU68 103 aa3.43□□□□□ -1.86
VPS29-209ENST00000551655 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
VPS29-209ENST00000551655 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
VPS29-209ENST00000551655 A0A1B0GV90 55 aa3.36□□□□□ -1.87
VPS29-209ENST00000551655 UQCR11O14957 56 aa3.19□□□□□ -1.9
VPS29-209ENST00000551655 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
VPS29-209ENST00000551655 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
VPS29-209ENST00000551655 COX7CP15954 63 aa3.11□□□□□ -1.91
VPS29-209ENST00000551655 K7ERS5 55 aa3.1□□□□□ -1.91
VPS29-209ENST00000551655 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.91
VPS29-209ENST00000551655 K7ERU9 68 aa3.02□□□□□ -1.93
VPS29-209ENST00000551655 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
VPS29-209ENST00000551655 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
VPS29-209ENST00000551655 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
VPS29-209ENST00000551655 ROMO1P60602 79 aa2.8□□□□□ -1.96
VPS29-209ENST00000551655 Q1T7F1 81 aa2.8□□□□□ -1.96
VPS29-209ENST00000551655 ATP5EP56381 51 aaPredicted RBP2.7□□□□□ -1.98
VPS29-209ENST00000551655 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
VPS29-209ENST00000551655 PSPHP1O15172 72 aa2.67□□□□□ -1.98
VPS29-209ENST00000551655 CCDC179H3BU77 68 aa2.65□□□□□ -1.99
VPS29-209ENST00000551655 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
VPS29-209ENST00000551655 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
VPS29-209ENST00000551655 A6NED7 52 aa2.47□□□□□ -2.01
VPS29-209ENST00000551655 TMEM258P61165 79 aa2.38□□□□□ -2.03
VPS29-209ENST00000551655 V9GYY9 64 aa2.36□□□□□ -2.03
VPS29-209ENST00000551655 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
VPS29-209ENST00000551655 PRM1P04553 51 aa1.44□□□□□ -2.18
VPS29-209ENST00000551655 LUZP6Q538Z0 58 aa1.33□□□□□ -2.2
VPS29-209ENST00000551655 BRK1Q8WUW1 75 aa1.31□□□□□ -2.2
VPS29-209ENST00000551655 PMAIP1Q13794 54 aa1.05□□□□□ -2.24
VPS29-209ENST00000551655 PRO0628Q9UI54 55 aa0.95□□□□□ -2.26
VPS29-209ENST00000551655 KTN1-AS1Q86SY8 53 aa0.4□□□□□ -2.35
VPS29-209ENST00000551655 INE1O15225 51 aa-0.05□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 31 ms