RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	KRTAP10-12	P60413	245 aa		3.63	□□□□□ -1.83
ATXN2-223	ENST00000551551	LCE1A	Q5T7P2	110 aa		3.63	□□□□□ -1.83
ATXN2-223	ENST00000551551		H7BZZ5	65 aa		3.62	□□□□□ -1.83
ATXN2-223	ENST00000551551	TMEM258	P61165	79 aa		3.62	□□□□□ -1.83
ATXN2-223	ENST00000551551	SPRR2E	P22531	72 aa		3.61	□□□□□ -1.83
ATXN2-223	ENST00000551551	SPRR2B	P35325	72 aa		3.61	□□□□□ -1.83
ATXN2-223	ENST00000551551	SPRR2A	P35326	72 aa		3.61	□□□□□ -1.83
ATXN2-223	ENST00000551551	MT3	P25713	68 aa		3.6	□□□□□ -1.83
ATXN2-223	ENST00000551551	KRTAP5-11	Q6L8G4	156 aa		3.6	□□□□□ -1.83
ATXN2-223	ENST00000551551	ATP5E	P56381	51 aa	Predicted RBP	3.59	□□□□□ -1.83
ATXN2-223	ENST00000551551		A0A1B0GU69	56 aa		3.58	□□□□□ -1.84
ATXN2-223	ENST00000551551	PRR15L	Q9BU68	103 aa		3.57	□□□□□ -1.84
ATXN2-223	ENST00000551551	ROMO1	P60602	79 aa		3.55	□□□□□ -1.84
ATXN2-223	ENST00000551551	KRTAP2-2	Q9BYT5	123 aa		3.54	□□□□□ -1.84
ATXN2-223	ENST00000551551	KRTAP2-1	Q9BYU5	128 aa		3.54	□□□□□ -1.84
ATXN2-223	ENST00000551551	KRTAP13-4	Q3LI77	160 aa		3.52	□□□□□ -1.85
ATXN2-223	ENST00000551551	SPRR2D	P22532	72 aa		3.51	□□□□□ -1.85
ATXN2-223	ENST00000551551		A0A0D9SG42	100 aa		3.5	□□□□□ -1.85
ATXN2-223	ENST00000551551	SPATA8	Q6RVD6	105 aa		3.48	□□□□□ -1.85
ATXN2-223	ENST00000551551	KRTAP12-1	P59990	96 aa		3.44	□□□□□ -1.86
ATXN2-223	ENST00000551551	CYSTM1	Q9H1C7	97 aa		3.44	□□□□□ -1.86
ATXN2-223	ENST00000551551	TNP1	P09430	55 aa		3.42	□□□□□ -1.86
ATXN2-223	ENST00000551551	UQCR11	O14957	56 aa		3.41	□□□□□ -1.86
ATXN2-223	ENST00000551551	LINC01558	Q9Y6Z2	57 aa		3.41	□□□□□ -1.86
ATXN2-223	ENST00000551551	PP632	Q6XCG6	107 aa		3.4	□□□□□ -1.87
ATXN2-223	ENST00000551551	LCE1F	Q5T754	118 aa		3.38	□□□□□ -1.87
ATXN2-223	ENST00000551551	LCE1E	Q5T753	118 aa		3.37	□□□□□ -1.87
ATXN2-223	ENST00000551551	MIR22HG	Q0VDD5	57 aa		3.36	□□□□□ -1.87
ATXN2-223	ENST00000551551	MT1G	P13640	62 aa		3.35	□□□□□ -1.87
ATXN2-223	ENST00000551551	KRTAP19-3	Q7Z4W3	81 aa		3.35	□□□□□ -1.87
ATXN2-223	ENST00000551551	C10orf95	Q9H7T3	257 aa		3.35	□□□□□ -1.87
ATXN2-223	ENST00000551551	KRTAP19-7	Q3SYF9	63 aa		3.34	□□□□□ -1.87
ATXN2-223	ENST00000551551		A8MU10	97 aa		3.33	□□□□□ -1.88
ATXN2-223	ENST00000551551	MT1E	P04732	61 aa		3.33	□□□□□ -1.88
ATXN2-223	ENST00000551551		Q1T7F1	81 aa		3.27	□□□□□ -1.89
ATXN2-223	ENST00000551551	KRTAP19-5	Q3LI72	72 aa		3.27	□□□□□ -1.89
ATXN2-223	ENST00000551551	AHNAK2	Q8IVF2	5795 aa		3.27	□□□□□ -1.89
ATXN2-223	ENST00000551551	DST	Q03001	7570 aa	Known RBP	3.21	□□□□□ -1.9
ATXN2-223	ENST00000551551	LCE3A	Q5TA76	89 aa		3.2	□□□□□ -1.9
ATXN2-223	ENST00000551551	KRTAP5-1	Q6L8H4	278 aa		3.19	□□□□□ -1.9
ATXN2-223	ENST00000551551	MT1L	Q93083	61 aa		3.19	□□□□□ -1.9
ATXN2-223	ENST00000551551	HMCN1	Q96RW7	5635 aa		3.18	□□□□□ -1.9
ATXN2-223	ENST00000551551	KRTAP12-3	P60328	96 aa		3.18	□□□□□ -1.9
ATXN2-223	ENST00000551551	MT1M	Q8N339	61 aa		3.17	□□□□□ -1.9
ATXN2-223	ENST00000551551	CDC42SE1	Q9NRR8	79 aa		3.14	□□□□□ -1.91
ATXN2-223	ENST00000551551	SPRR5	A0A1B0GTR4	108 aa		3.12	□□□□□ -1.91
ATXN2-223	ENST00000551551	LCE3C	Q5T5A8	94 aa		3.12	□□□□□ -1.91
ATXN2-223	ENST00000551551	KRTAP5-10	Q6L8G5	202 aa		3.12	□□□□□ -1.91
ATXN2-223	ENST00000551551	KRTAP5-4	Q6L8H1	288 aa		3.08	□□□□□ -1.92
ATXN2-223	ENST00000551551	KRTAP4-4	Q9BYR3	166 aa		3.07	□□□□□ -1.92
ATXN2-223	ENST00000551551	KRTAP5-7	Q6L8G8	165 aa		3.06	□□□□□ -1.92
ATXN2-223	ENST00000551551	MT4	P47944	62 aa		3.01	□□□□□ -1.93
ATXN2-223	ENST00000551551	INE1	O15225	51 aa		2.99	□□□□□ -1.93
ATXN2-223	ENST00000551551	KRTAP12-4	P60329	112 aa		2.99	□□□□□ -1.93
ATXN2-223	ENST00000551551	KRTAP4-3	Q9BYR4	195 aa		2.96	□□□□□ -1.94
ATXN2-223	ENST00000551551	AHNAK	Q09666	5890 aa	Known RBP	2.96	□□□□□ -1.94
ATXN2-223	ENST00000551551	KRTAP9-6	A8MVA2	160 aa		2.94	□□□□□ -1.94
ATXN2-223	ENST00000551551	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.9	□□□□□ -1.95
ATXN2-223	ENST00000551551	LCE3E	Q5T5B0	92 aa		2.86	□□□□□ -1.95
ATXN2-223	ENST00000551551	KRTAP20-2	Q3LI61	65 aa		2.85	□□□□□ -1.95
ATXN2-223	ENST00000551551	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.8	□□□□□ -1.96
ATXN2-223	ENST00000551551	MUC5AC	P98088	5654 aa		2.76	□□□□□ -1.97
ATXN2-223	ENST00000551551	MT1A	P04731	61 aa		2.75	□□□□□ -1.97
ATXN2-223	ENST00000551551	OBSCN	Q5VST9	7968 aa		2.68	□□□□□ -1.98
ATXN2-223	ENST00000551551	SYNE1	Q8NF91	8797 aa	Known RBP	2.66	□□□□□ -1.98
ATXN2-223	ENST00000551551	KRTAP6-1	Q3LI64	71 aa		2.66	□□□□□ -1.98
ATXN2-223	ENST00000551551	KRTAP5-2	Q701N4	177 aa		2.66	□□□□□ -1.98
ATXN2-223	ENST00000551551	KRTAP6-2	Q3LI66	62 aa		2.56	□□□□□ -2
ATXN2-223	ENST00000551551	LCE3D	Q9BYE3	92 aa		2.56	□□□□□ -2
ATXN2-223	ENST00000551551	KRTAP5-8	O75690	187 aa		2.5	□□□□□ -2.01
ATXN2-223	ENST00000551551	LCE1C	Q5T751	118 aa		2.21	□□□□□ -2.06
ATXN2-223	ENST00000551551	LCE1B	Q5T7P3	118 aa		2.21	□□□□□ -2.06
ATXN2-223	ENST00000551551	PHGR1	C9JFL3	82 aa		1.85	□□□□□ -2.11
ATXN2-223	ENST00000551551	KRTAP21-2	Q3LI59	83 aa		1.77	□□□□□ -2.13
ATXN2-223	ENST00000551551	MUC19	Q7Z5P9	8384 aa		1.77	□□□□□ -2.13
ATXN2-223	ENST00000551551	PRM1	P04553	51 aa		1.46	□□□□□ -2.18
ATXN2-223	ENST00000551551	KRTAP21-1	Q3LI58	79 aa		1.35	□□□□□ -2.19
ATXN2-223	ENST00000551551	MUC16	Q8WXI7	14507 aa		1.06	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 145.7 ms