RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 UQCR11O14957 56 aa6.96□□□□□ -1.3
GCN1-207ENST00000550471 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
GCN1-207ENST00000550471 TMEM258P61165 79 aa6.93□□□□□ -1.3
GCN1-207ENST00000550471 KRTAP12-3P60328 96 aa6.85□□□□□ -1.31
GCN1-207ENST00000550471 MT4P47944 62 aa6.83□□□□□ -1.32
GCN1-207ENST00000550471 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
GCN1-207ENST00000550471 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
GCN1-207ENST00000550471 HMCN1Q96RW7 5635 aa6.77□□□□□ -1.33
GCN1-207ENST00000550471 K7ERS5 55 aa6.77□□□□□ -1.33
GCN1-207ENST00000550471 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
GCN1-207ENST00000550471 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
GCN1-207ENST00000550471 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
GCN1-207ENST00000550471 V9GYY9 64 aa6.69□□□□□ -1.34
GCN1-207ENST00000550471 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
GCN1-207ENST00000550471 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
GCN1-207ENST00000550471 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
GCN1-207ENST00000550471 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
GCN1-207ENST00000550471 Q1T7F1 81 aa6.52□□□□□ -1.37
GCN1-207ENST00000550471 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
GCN1-207ENST00000550471 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
GCN1-207ENST00000550471 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
GCN1-207ENST00000550471 PSPHP1O15172 72 aa6.48□□□□□ -1.37
GCN1-207ENST00000550471 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
GCN1-207ENST00000550471 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
GCN1-207ENST00000550471 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
GCN1-207ENST00000550471 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
GCN1-207ENST00000550471 A6NED7 52 aa6.33□□□□□ -1.4
GCN1-207ENST00000550471 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
GCN1-207ENST00000550471 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
GCN1-207ENST00000550471 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
GCN1-207ENST00000550471 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
GCN1-207ENST00000550471 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
GCN1-207ENST00000550471 ROMO1P60602 79 aa6.18□□□□□ -1.42
GCN1-207ENST00000550471 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
GCN1-207ENST00000550471 MT1AP04731 61 aa6.06□□□□□ -1.44
GCN1-207ENST00000550471 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
GCN1-207ENST00000550471 KRTAP5-2Q701N4 177 aa5.96□□□□□ -1.46
GCN1-207ENST00000550471 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
GCN1-207ENST00000550471 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
GCN1-207ENST00000550471 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
GCN1-207ENST00000550471 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
GCN1-207ENST00000550471 PCP4P48539 62 aa5.76□□□□□ -1.49
GCN1-207ENST00000550471 KRTAP6-2Q3LI66 62 aa5.72□□□□□ -1.49
GCN1-207ENST00000550471 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
GCN1-207ENST00000550471 MT3P25713 68 aa5.61□□□□□ -1.51
GCN1-207ENST00000550471 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
GCN1-207ENST00000550471 MUC5ACP98088 5654 aa5.54□□□□□ -1.52
GCN1-207ENST00000550471 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
GCN1-207ENST00000550471 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
GCN1-207ENST00000550471 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
GCN1-207ENST00000550471 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
GCN1-207ENST00000550471 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
GCN1-207ENST00000550471 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
GCN1-207ENST00000550471 H3BS24 57 aa5.19□□□□□ -1.58
GCN1-207ENST00000550471 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
GCN1-207ENST00000550471 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
GCN1-207ENST00000550471 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
GCN1-207ENST00000550471 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
GCN1-207ENST00000550471 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
GCN1-207ENST00000550471 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
GCN1-207ENST00000550471 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
GCN1-207ENST00000550471 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
GCN1-207ENST00000550471 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
GCN1-207ENST00000550471 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
GCN1-207ENST00000550471 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
GCN1-207ENST00000550471 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
GCN1-207ENST00000550471 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
GCN1-207ENST00000550471 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
GCN1-207ENST00000550471 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
GCN1-207ENST00000550471 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
GCN1-207ENST00000550471 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
GCN1-207ENST00000550471 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
GCN1-207ENST00000550471 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
GCN1-207ENST00000550471 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
GCN1-207ENST00000550471 PRM1P04553 51 aa3.08□□□□□ -1.92
GCN1-207ENST00000550471 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
GCN1-207ENST00000550471 INE1O15225 51 aa2.57□□□□□ -2
GCN1-207ENST00000550471 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 127.2 ms