RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
ATF1-202ENST00000549612 HMCN1Q96RW7 5635 aa6.8□□□□□ -1.32
ATF1-202ENST00000549612 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
ATF1-202ENST00000549612 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
ATF1-202ENST00000549612 PCP4P48539 62 aa6.76□□□□□ -1.33
ATF1-202ENST00000549612 MT4P47944 62 aa6.74□□□□□ -1.33
ATF1-202ENST00000549612 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
ATF1-202ENST00000549612 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
ATF1-202ENST00000549612 UQCR11O14957 56 aa6.62□□□□□ -1.35
ATF1-202ENST00000549612 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
ATF1-202ENST00000549612 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
ATF1-202ENST00000549612 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
ATF1-202ENST00000549612 V9GYY9 64 aa6.55□□□□□ -1.36
ATF1-202ENST00000549612 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
ATF1-202ENST00000549612 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
ATF1-202ENST00000549612 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
ATF1-202ENST00000549612 KRTAP5-10Q6L8G5 202 aa6.43□□□□□ -1.38
ATF1-202ENST00000549612 Q1T7F1 81 aa6.41□□□□□ -1.38
ATF1-202ENST00000549612 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
ATF1-202ENST00000549612 K7ERS5 55 aa6.35□□□□□ -1.39
ATF1-202ENST00000549612 KRTAP20-2Q3LI61 65 aa6.32□□□□□ -1.4
ATF1-202ENST00000549612 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
ATF1-202ENST00000549612 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
ATF1-202ENST00000549612 PSPHP1O15172 72 aa6.27□□□□□ -1.41
ATF1-202ENST00000549612 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
ATF1-202ENST00000549612 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
ATF1-202ENST00000549612 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
ATF1-202ENST00000549612 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
ATF1-202ENST00000549612 KRTAP5-7Q6L8G8 165 aa6.21□□□□□ -1.42
ATF1-202ENST00000549612 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
ATF1-202ENST00000549612 A6NED7 52 aa6.17□□□□□ -1.42
ATF1-202ENST00000549612 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
ATF1-202ENST00000549612 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
ATF1-202ENST00000549612 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
ATF1-202ENST00000549612 MT1AP04731 61 aa5.92□□□□□ -1.46
ATF1-202ENST00000549612 ROMO1P60602 79 aa5.91□□□□□ -1.46
ATF1-202ENST00000549612 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
ATF1-202ENST00000549612 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
ATF1-202ENST00000549612 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
ATF1-202ENST00000549612 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
ATF1-202ENST00000549612 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
ATF1-202ENST00000549612 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
ATF1-202ENST00000549612 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
ATF1-202ENST00000549612 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
ATF1-202ENST00000549612 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
ATF1-202ENST00000549612 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
ATF1-202ENST00000549612 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
ATF1-202ENST00000549612 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
ATF1-202ENST00000549612 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
ATF1-202ENST00000549612 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
ATF1-202ENST00000549612 MT3P25713 68 aa5.41□□□□□ -1.54
ATF1-202ENST00000549612 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
ATF1-202ENST00000549612 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
ATF1-202ENST00000549612 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
ATF1-202ENST00000549612 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
ATF1-202ENST00000549612 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
ATF1-202ENST00000549612 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
ATF1-202ENST00000549612 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
ATF1-202ENST00000549612 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
ATF1-202ENST00000549612 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
ATF1-202ENST00000549612 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
ATF1-202ENST00000549612 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
ATF1-202ENST00000549612 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
ATF1-202ENST00000549612 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
ATF1-202ENST00000549612 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
ATF1-202ENST00000549612 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
ATF1-202ENST00000549612 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
ATF1-202ENST00000549612 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
ATF1-202ENST00000549612 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
ATF1-202ENST00000549612 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
ATF1-202ENST00000549612 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
ATF1-202ENST00000549612 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
ATF1-202ENST00000549612 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
ATF1-202ENST00000549612 INE1O15225 51 aa3.27□□□□□ -1.89
ATF1-202ENST00000549612 PRM1P04553 51 aa3□□□□□ -1.93
ATF1-202ENST00000549612 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
ATF1-202ENST00000549612 H3BS24 57 aa2.57□□□□□ -2
ATF1-202ENST00000549612 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms