RNA–Protein interactions for RNA: ENST00000548883.5

C12orf42-208, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C12orf42, Length 1,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-208ENST00000548883 LINC01558Q9Y6Z2 57 aa7.19□□□□□ -1.26
C12orf42-208ENST00000548883 MT4P47944 62 aa7.11□□□□□ -1.27
C12orf42-208ENST00000548883 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
C12orf42-208ENST00000548883 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
C12orf42-208ENST00000548883 KRTAP5-4Q6L8H1 288 aa7.01□□□□□ -1.29
C12orf42-208ENST00000548883 UQCR11O14957 56 aa7□□□□□ -1.29
C12orf42-208ENST00000548883 V9GYY9 64 aa6.99□□□□□ -1.29
C12orf42-208ENST00000548883 PCP4P48539 62 aa6.95□□□□□ -1.3
C12orf42-208ENST00000548883 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
C12orf42-208ENST00000548883 Q1T7F1 81 aa6.89□□□□□ -1.31
C12orf42-208ENST00000548883 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
C12orf42-208ENST00000548883 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
C12orf42-208ENST00000548883 PSPHP1O15172 72 aa6.85□□□□□ -1.31
C12orf42-208ENST00000548883 MIR22HGQ0VDD5 57 aa6.85□□□□□ -1.31
C12orf42-208ENST00000548883 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
C12orf42-208ENST00000548883 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
C12orf42-208ENST00000548883 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.32
C12orf42-208ENST00000548883 KRTAP5-10Q6L8G5 202 aa6.77□□□□□ -1.32
C12orf42-208ENST00000548883 K7ERS5 55 aa6.74□□□□□ -1.33
C12orf42-208ENST00000548883 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
C12orf42-208ENST00000548883 A6NED7 52 aa6.68□□□□□ -1.34
C12orf42-208ENST00000548883 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
C12orf42-208ENST00000548883 KRTAP20-2Q3LI61 65 aa6.63□□□□□ -1.35
C12orf42-208ENST00000548883 SPRR5A0A1B0GTR4 108 aa6.6□□□□□ -1.35
C12orf42-208ENST00000548883 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
C12orf42-208ENST00000548883 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
C12orf42-208ENST00000548883 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
C12orf42-208ENST00000548883 KRTAP5-7Q6L8G8 165 aa6.53□□□□□ -1.36
C12orf42-208ENST00000548883 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
C12orf42-208ENST00000548883 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
C12orf42-208ENST00000548883 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
C12orf42-208ENST00000548883 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.39
C12orf42-208ENST00000548883 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
C12orf42-208ENST00000548883 ROMO1P60602 79 aa6.27□□□□□ -1.41
C12orf42-208ENST00000548883 MT1AP04731 61 aa6.18□□□□□ -1.42
C12orf42-208ENST00000548883 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
C12orf42-208ENST00000548883 KRTAP5-2Q701N4 177 aa6.12□□□□□ -1.43
C12orf42-208ENST00000548883 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
C12orf42-208ENST00000548883 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
C12orf42-208ENST00000548883 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
C12orf42-208ENST00000548883 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
C12orf42-208ENST00000548883 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
C12orf42-208ENST00000548883 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
C12orf42-208ENST00000548883 KRTAP4-12Q9BQ66 201 aa5.83□□□□□ -1.48
C12orf42-208ENST00000548883 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
C12orf42-208ENST00000548883 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
C12orf42-208ENST00000548883 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
C12orf42-208ENST00000548883 MT3P25713 68 aa5.67□□□□□ -1.5
C12orf42-208ENST00000548883 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
C12orf42-208ENST00000548883 MUC5BQ9HC84 5762 aaPredicted RBP5.66□□□□□ -1.5
C12orf42-208ENST00000548883 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
C12orf42-208ENST00000548883 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
C12orf42-208ENST00000548883 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
C12orf42-208ENST00000548883 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
C12orf42-208ENST00000548883 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
C12orf42-208ENST00000548883 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
C12orf42-208ENST00000548883 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
C12orf42-208ENST00000548883 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
C12orf42-208ENST00000548883 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
C12orf42-208ENST00000548883 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
C12orf42-208ENST00000548883 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
C12orf42-208ENST00000548883 H3BS24 57 aa4.56□□□□□ -1.68
C12orf42-208ENST00000548883 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
C12orf42-208ENST00000548883 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
C12orf42-208ENST00000548883 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
C12orf42-208ENST00000548883 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
C12orf42-208ENST00000548883 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
C12orf42-208ENST00000548883 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
C12orf42-208ENST00000548883 PHGR1C9JFL3 82 aa3.96□□□□□ -1.77
C12orf42-208ENST00000548883 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
C12orf42-208ENST00000548883 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
C12orf42-208ENST00000548883 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
C12orf42-208ENST00000548883 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
C12orf42-208ENST00000548883 PRM1P04553 51 aa3.2□□□□□ -1.9
C12orf42-208ENST00000548883 INE1O15225 51 aa3.19□□□□□ -1.9
C12orf42-208ENST00000548883 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
C12orf42-208ENST00000548883 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms