RNA–Protein interactions for RNA: ENST00000546969.1

CASP9-211, Transcript of caspase 9, humanhuman

TSL 2

Gene CASP9, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-211ENST00000546969 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
CASP9-211ENST00000546969 TMEM258P61165 79 aa5.91□□□□□ -1.46
CASP9-211ENST00000546969 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
CASP9-211ENST00000546969 MT4P47944 62 aa5.85□□□□□ -1.47
CASP9-211ENST00000546969 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
CASP9-211ENST00000546969 K7ERS5 55 aa5.82□□□□□ -1.48
CASP9-211ENST00000546969 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
CASP9-211ENST00000546969 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
CASP9-211ENST00000546969 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
CASP9-211ENST00000546969 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
CASP9-211ENST00000546969 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
CASP9-211ENST00000546969 V9GYY9 64 aa5.7□□□□□ -1.5
CASP9-211ENST00000546969 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
CASP9-211ENST00000546969 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
CASP9-211ENST00000546969 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
CASP9-211ENST00000546969 PSPHP1O15172 72 aa5.59□□□□□ -1.51
CASP9-211ENST00000546969 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
CASP9-211ENST00000546969 PCP4P48539 62 aa5.56□□□□□ -1.52
CASP9-211ENST00000546969 Q1T7F1 81 aa5.54□□□□□ -1.52
CASP9-211ENST00000546969 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
CASP9-211ENST00000546969 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
CASP9-211ENST00000546969 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
CASP9-211ENST00000546969 A6NED7 52 aa5.46□□□□□ -1.54
CASP9-211ENST00000546969 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
CASP9-211ENST00000546969 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
CASP9-211ENST00000546969 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
CASP9-211ENST00000546969 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
CASP9-211ENST00000546969 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
CASP9-211ENST00000546969 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
CASP9-211ENST00000546969 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
CASP9-211ENST00000546969 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
CASP9-211ENST00000546969 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
CASP9-211ENST00000546969 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
CASP9-211ENST00000546969 ROMO1P60602 79 aa5.29□□□□□ -1.56
CASP9-211ENST00000546969 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
CASP9-211ENST00000546969 MT1AP04731 61 aa5.12□□□□□ -1.59
CASP9-211ENST00000546969 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
CASP9-211ENST00000546969 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
CASP9-211ENST00000546969 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
CASP9-211ENST00000546969 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
CASP9-211ENST00000546969 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
CASP9-211ENST00000546969 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
CASP9-211ENST00000546969 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
CASP9-211ENST00000546969 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
CASP9-211ENST00000546969 MT3P25713 68 aa4.75□□□□□ -1.65
CASP9-211ENST00000546969 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
CASP9-211ENST00000546969 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
CASP9-211ENST00000546969 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
CASP9-211ENST00000546969 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
CASP9-211ENST00000546969 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
CASP9-211ENST00000546969 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
CASP9-211ENST00000546969 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
CASP9-211ENST00000546969 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
CASP9-211ENST00000546969 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
CASP9-211ENST00000546969 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
CASP9-211ENST00000546969 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
CASP9-211ENST00000546969 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
CASP9-211ENST00000546969 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CASP9-211ENST00000546969 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
CASP9-211ENST00000546969 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CASP9-211ENST00000546969 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
CASP9-211ENST00000546969 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
CASP9-211ENST00000546969 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
CASP9-211ENST00000546969 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
CASP9-211ENST00000546969 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
CASP9-211ENST00000546969 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CASP9-211ENST00000546969 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
CASP9-211ENST00000546969 H3BS24 57 aa3.51□□□□□ -1.85
CASP9-211ENST00000546969 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
CASP9-211ENST00000546969 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
CASP9-211ENST00000546969 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
CASP9-211ENST00000546969 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
CASP9-211ENST00000546969 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CASP9-211ENST00000546969 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CASP9-211ENST00000546969 INE1O15225 51 aa2.85□□□□□ -1.95
CASP9-211ENST00000546969 PRM1P04553 51 aa2.66□□□□□ -1.98
CASP9-211ENST00000546969 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CASP9-211ENST00000546969 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 107.8 ms