RNA–Protein interactions for RNA: ENST00000546799.1

GDF11-202, Transcript of growth differentiation factor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene GDF11, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11-202ENST00000546799 PP632Q6XCG6 107 aa7□□□□□ -1.29
GDF11-202ENST00000546799 V9GYY9 64 aa7□□□□□ -1.29
GDF11-202ENST00000546799 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
GDF11-202ENST00000546799 Q1T7F1 81 aa6.97□□□□□ -1.29
GDF11-202ENST00000546799 PSPHP1O15172 72 aa6.96□□□□□ -1.3
GDF11-202ENST00000546799 PCP4P48539 62 aa6.96□□□□□ -1.3
GDF11-202ENST00000546799 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
GDF11-202ENST00000546799 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
GDF11-202ENST00000546799 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
GDF11-202ENST00000546799 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
GDF11-202ENST00000546799 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
GDF11-202ENST00000546799 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
GDF11-202ENST00000546799 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
GDF11-202ENST00000546799 MT4P47944 62 aa6.77□□□□□ -1.33
GDF11-202ENST00000546799 K7ERS5 55 aa6.76□□□□□ -1.33
GDF11-202ENST00000546799 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
GDF11-202ENST00000546799 A6NED7 52 aa6.72□□□□□ -1.33
GDF11-202ENST00000546799 AHNAK2Q8IVF2 5795 aa6.69□□□□□ -1.34
GDF11-202ENST00000546799 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
GDF11-202ENST00000546799 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
GDF11-202ENST00000546799 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
GDF11-202ENST00000546799 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
GDF11-202ENST00000546799 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
GDF11-202ENST00000546799 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
GDF11-202ENST00000546799 KRTAP5-10Q6L8G5 202 aa6.39□□□□□ -1.39
GDF11-202ENST00000546799 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
GDF11-202ENST00000546799 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
GDF11-202ENST00000546799 ROMO1P60602 79 aa6.36□□□□□ -1.39
GDF11-202ENST00000546799 KRTAP20-2Q3LI61 65 aa6.36□□□□□ -1.39
GDF11-202ENST00000546799 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
GDF11-202ENST00000546799 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
GDF11-202ENST00000546799 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
GDF11-202ENST00000546799 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
GDF11-202ENST00000546799 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
GDF11-202ENST00000546799 KRTAP5-7Q6L8G8 165 aa6.11□□□□□ -1.43
GDF11-202ENST00000546799 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
GDF11-202ENST00000546799 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
GDF11-202ENST00000546799 MT1AP04731 61 aa6.02□□□□□ -1.45
GDF11-202ENST00000546799 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
GDF11-202ENST00000546799 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
GDF11-202ENST00000546799 H3BS24 57 aa5.92□□□□□ -1.46
GDF11-202ENST00000546799 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
GDF11-202ENST00000546799 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
GDF11-202ENST00000546799 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
GDF11-202ENST00000546799 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
GDF11-202ENST00000546799 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.5
GDF11-202ENST00000546799 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
GDF11-202ENST00000546799 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
GDF11-202ENST00000546799 MUC5BQ9HC84 5762 aaPredicted RBP5.49□□□□□ -1.53
GDF11-202ENST00000546799 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
GDF11-202ENST00000546799 MT3P25713 68 aa5.47□□□□□ -1.53
GDF11-202ENST00000546799 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
GDF11-202ENST00000546799 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
GDF11-202ENST00000546799 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
GDF11-202ENST00000546799 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
GDF11-202ENST00000546799 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
GDF11-202ENST00000546799 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
GDF11-202ENST00000546799 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
GDF11-202ENST00000546799 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
GDF11-202ENST00000546799 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
GDF11-202ENST00000546799 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
GDF11-202ENST00000546799 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
GDF11-202ENST00000546799 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
GDF11-202ENST00000546799 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
GDF11-202ENST00000546799 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
GDF11-202ENST00000546799 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
GDF11-202ENST00000546799 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
GDF11-202ENST00000546799 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
GDF11-202ENST00000546799 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
GDF11-202ENST00000546799 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
GDF11-202ENST00000546799 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
GDF11-202ENST00000546799 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
GDF11-202ENST00000546799 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
GDF11-202ENST00000546799 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
GDF11-202ENST00000546799 PRM1P04553 51 aa3.27□□□□□ -1.89
GDF11-202ENST00000546799 INE1O15225 51 aa3.18□□□□□ -1.9
GDF11-202ENST00000546799 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
GDF11-202ENST00000546799 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 270.1 ms