RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
DDX55-212ENST00000544738 TNP1P09430 55 aa5.76□□□□□ -1.49
DDX55-212ENST00000544738 MT1MQ8N339 61 aa5.74□□□□□ -1.49
DDX55-212ENST00000544738 MT1LQ93083 61 aa5.74□□□□□ -1.49
DDX55-212ENST00000544738 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
DDX55-212ENST00000544738 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
DDX55-212ENST00000544738 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
DDX55-212ENST00000544738 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
DDX55-212ENST00000544738 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
DDX55-212ENST00000544738 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
DDX55-212ENST00000544738 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
DDX55-212ENST00000544738 UQCR11O14957 56 aa5.53□□□□□ -1.52
DDX55-212ENST00000544738 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
DDX55-212ENST00000544738 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
DDX55-212ENST00000544738 TMEM258P61165 79 aa5.47□□□□□ -1.53
DDX55-212ENST00000544738 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
DDX55-212ENST00000544738 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
DDX55-212ENST00000544738 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
DDX55-212ENST00000544738 K7ERS5 55 aa5.34□□□□□ -1.55
DDX55-212ENST00000544738 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
DDX55-212ENST00000544738 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
DDX55-212ENST00000544738 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
DDX55-212ENST00000544738 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
DDX55-212ENST00000544738 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
DDX55-212ENST00000544738 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
DDX55-212ENST00000544738 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
DDX55-212ENST00000544738 V9GYY9 64 aa5.24□□□□□ -1.57
DDX55-212ENST00000544738 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
DDX55-212ENST00000544738 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
DDX55-212ENST00000544738 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
DDX55-212ENST00000544738 PSPHP1O15172 72 aa5.19□□□□□ -1.58
DDX55-212ENST00000544738 Q1T7F1 81 aa5.17□□□□□ -1.58
DDX55-212ENST00000544738 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
DDX55-212ENST00000544738 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
DDX55-212ENST00000544738 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
DDX55-212ENST00000544738 A6NED7 52 aa5.03□□□□□ -1.6
DDX55-212ENST00000544738 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
DDX55-212ENST00000544738 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
DDX55-212ENST00000544738 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
DDX55-212ENST00000544738 ROMO1P60602 79 aa4.91□□□□□ -1.62
DDX55-212ENST00000544738 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
DDX55-212ENST00000544738 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
DDX55-212ENST00000544738 MT1AP04731 61 aa4.9□□□□□ -1.63
DDX55-212ENST00000544738 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
DDX55-212ENST00000544738 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
DDX55-212ENST00000544738 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
DDX55-212ENST00000544738 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
DDX55-212ENST00000544738 PCP4P48539 62 aa4.56□□□□□ -1.68
DDX55-212ENST00000544738 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
DDX55-212ENST00000544738 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
DDX55-212ENST00000544738 MT3P25713 68 aa4.51□□□□□ -1.69
DDX55-212ENST00000544738 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
DDX55-212ENST00000544738 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
DDX55-212ENST00000544738 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
DDX55-212ENST00000544738 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
DDX55-212ENST00000544738 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
DDX55-212ENST00000544738 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
DDX55-212ENST00000544738 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
DDX55-212ENST00000544738 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
DDX55-212ENST00000544738 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
DDX55-212ENST00000544738 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
DDX55-212ENST00000544738 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
DDX55-212ENST00000544738 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
DDX55-212ENST00000544738 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
DDX55-212ENST00000544738 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
DDX55-212ENST00000544738 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
DDX55-212ENST00000544738 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
DDX55-212ENST00000544738 SVIPQ8NHG7 77 aa3.26□□□□□ -1.89
DDX55-212ENST00000544738 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
DDX55-212ENST00000544738 H3BS24 57 aa3.19□□□□□ -1.9
DDX55-212ENST00000544738 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
DDX55-212ENST00000544738 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
DDX55-212ENST00000544738 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
DDX55-212ENST00000544738 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
DDX55-212ENST00000544738 PRM1P04553 51 aa2.48□□□□□ -2.01
DDX55-212ENST00000544738 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
DDX55-212ENST00000544738 INE1O15225 51 aa2.25□□□□□ -2.05
DDX55-212ENST00000544738 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 58.9 ms