RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 TNP1P09430 55 aa0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH14Q0VDD8 3507 aa0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH9Q9NYC9 4486 aa0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 LYSTQ99698 3801 aa0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 DYNC2H1Q8NCM8 4307 aaKnown RBP0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH7Q8WXX0 4024 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 MYO15AQ9UKN7 3530 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 COL7A1Q02388 2944 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 DCHS2Q6V1P9 2916 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 DNAH17Q9UFH2 4485 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 NBASA2RRP1 2371 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 DNAH6Q9C0G6 4158 aa0.71□□□□□ -2.3
GTF2H3-213ENST00000543415 PKHD1L1Q86WI1 4243 aa0.7□□□□□ -2.3
GTF2H3-213ENST00000543415 KMT2AQ03164 3969 aa0.7□□□□□ -2.3
GTF2H3-213ENST00000543415 C9orf92A6NGG3 77 aa0.7□□□□□ -2.3
GTF2H3-213ENST00000543415 TACC2O95359 2948 aa0.7□□□□□ -2.3
GTF2H3-213ENST00000543415 FAT3Q8TDW7 4589 aa0.7□□□□□ -2.3
GTF2H3-213ENST00000543415 HTN3P15516 51 aa0.69□□□□□ -2.3
GTF2H3-213ENST00000543415 DNAH5Q8TE73 4624 aa0.69□□□□□ -2.3
GTF2H3-213ENST00000543415 FLGP20930 4061 aaPredicted RBP0.69□□□□□ -2.3
GTF2H3-213ENST00000543415 CENPEQ02224 2701 aa0.69□□□□□ -2.3
GTF2H3-213ENST00000543415 PLECQ15149 4684 aaKnown RBP0.68□□□□□ -2.3
GTF2H3-213ENST00000543415 CSMD2Q7Z408 3487 aa0.68□□□□□ -2.3
GTF2H3-213ENST00000543415 VPS13CQ709C8 3753 aa0.68□□□□□ -2.3
GTF2H3-213ENST00000543415 PKD1P98161 4303 aa0.68□□□□□ -2.3
GTF2H3-213ENST00000543415 CDH23Q9H251 3354 aa0.67□□□□□ -2.3
GTF2H3-213ENST00000543415 HECTD4Q9Y4D8 3996 aa0.66□□□□□ -2.3
GTF2H3-213ENST00000543415 HSPG2P98160 4391 aa0.66□□□□□ -2.3
GTF2H3-213ENST00000543415 DEFB4AO15263 64 aa0.66□□□□□ -2.3
GTF2H3-213ENST00000543415 ADGRG4Q8IZF6 3080 aa0.66□□□□□ -2.3
GTF2H3-213ENST00000543415 CUBNO60494 3623 aa0.65□□□□□ -2.31
GTF2H3-213ENST00000543415 DYNC1H1Q14204 4646 aaKnown RBP0.65□□□□□ -2.31
GTF2H3-213ENST00000543415 MUC12Q9UKN1 5478 aa0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 SVEP1Q4LDE5 3571 aa0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 PRM1P04553 51 aa0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 KRTAP8-1Q8IUC2 63 aa0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 LPAP08519 4548 aa0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 HRNRQ86YZ3 2850 aaPredicted RBP0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 FAT2Q9NYQ8 4349 aa0.64□□□□□ -2.31
GTF2H3-213ENST00000543415 USH2AO75445 5202 aa0.63□□□□□ -2.31
GTF2H3-213ENST00000543415 STARD9Q9P2P6 4700 aa0.62□□□□□ -2.31
GTF2H3-213ENST00000543415 PKHD1P08F94 4074 aa0.62□□□□□ -2.31
GTF2H3-213ENST00000543415 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
GTF2H3-213ENST00000543415 TNXBP22105 4242 aa0.61□□□□□ -2.31
GTF2H3-213ENST00000543415 SPRR2DP22532 72 aa0.59□□□□□ -2.31
GTF2H3-213ENST00000543415 FAT1Q14517 4588 aa0.59□□□□□ -2.32
GTF2H3-213ENST00000543415 MUC17Q685J3 4493 aa0.58□□□□□ -2.32
GTF2H3-213ENST00000543415 SMR3BP02814 79 aaPredicted RBP0.56□□□□□ -2.32
GTF2H3-213ENST00000543415 LRP1BQ9NZR2 4599 aa0.56□□□□□ -2.32
GTF2H3-213ENST00000543415 LRP2P98164 4655 aa0.54□□□□□ -2.32
GTF2H3-213ENST00000543415 SPRR2BP35325 72 aa0.54□□□□□ -2.32
GTF2H3-213ENST00000543415 KRTAP19-5Q3LI72 72 aa0.54□□□□□ -2.32
GTF2H3-213ENST00000543415 MT1AP04731 61 aa0.51□□□□□ -2.33
GTF2H3-213ENST00000543415 SPRR2GQ9BYE4 73 aa0.49□□□□□ -2.33
GTF2H3-213ENST00000543415 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
GTF2H3-213ENST00000543415 SPRR2AP35326 72 aa0.47□□□□□ -2.33
GTF2H3-213ENST00000543415 MT1EP04732 61 aa0.46□□□□□ -2.34
GTF2H3-213ENST00000543415 SPRR2FQ96RM1 72 aa0.46□□□□□ -2.34
GTF2H3-213ENST00000543415 KRTAP19-8Q3LI54 63 aa0.45□□□□□ -2.34
GTF2H3-213ENST00000543415 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
GTF2H3-213ENST00000543415 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
GTF2H3-213ENST00000543415 SPRR2EP22531 72 aa0.44□□□□□ -2.34
GTF2H3-213ENST00000543415 MT1XP80297 61 aa0.43□□□□□ -2.34
GTF2H3-213ENST00000543415 KRTAP19-2Q3LHN2 52 aa0.43□□□□□ -2.34
GTF2H3-213ENST00000543415 MT1LQ93083 61 aa0.43□□□□□ -2.34
GTF2H3-213ENST00000543415 MT1HP80294 61 aa0.41□□□□□ -2.34
GTF2H3-213ENST00000543415 KRTAP19-7Q3SYF9 63 aa0.39□□□□□ -2.35
GTF2H3-213ENST00000543415 MT1BP07438 61 aa0.38□□□□□ -2.35
GTF2H3-213ENST00000543415 MT1HL1P0DM35 61 aa0.35□□□□□ -2.35
GTF2H3-213ENST00000543415 MT1GP13640 62 aa0.35□□□□□ -2.35
GTF2H3-213ENST00000543415 MT2AP02795 61 aa0.34□□□□□ -2.36
GTF2H3-213ENST00000543415 MT1FP04733 61 aa0.33□□□□□ -2.36
GTF2H3-213ENST00000543415 MT1MQ8N339 61 aa0.33□□□□□ -2.36
GTF2H3-213ENST00000543415 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
GTF2H3-213ENST00000543415 KRTAP19-6Q3LI70 58 aa0.32□□□□□ -2.36
GTF2H3-213ENST00000543415 MT4P47944 62 aa0.27□□□□□ -2.37
GTF2H3-213ENST00000543415 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 127.6 ms