RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
SCARB1-207ENST00000541661 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
SCARB1-207ENST00000541661 A8MU10 97 aa4.82□□□□□ -1.64
SCARB1-207ENST00000541661 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
SCARB1-207ENST00000541661 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
SCARB1-207ENST00000541661 MT1GP13640 62 aa4.78□□□□□ -1.64
SCARB1-207ENST00000541661 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
SCARB1-207ENST00000541661 MT4P47944 62 aa4.76□□□□□ -1.65
SCARB1-207ENST00000541661 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
SCARB1-207ENST00000541661 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
SCARB1-207ENST00000541661 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
SCARB1-207ENST00000541661 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
SCARB1-207ENST00000541661 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
SCARB1-207ENST00000541661 A0A0D9SG42 100 aa4.68□□□□□ -1.66
SCARB1-207ENST00000541661 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
SCARB1-207ENST00000541661 MT1MQ8N339 61 aa4.68□□□□□ -1.66
SCARB1-207ENST00000541661 H3BS24 57 aa4.62□□□□□ -1.67
SCARB1-207ENST00000541661 MT1LQ93083 61 aa4.62□□□□□ -1.67
SCARB1-207ENST00000541661 K7ERS5 55 aa4.61□□□□□ -1.67
SCARB1-207ENST00000541661 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
SCARB1-207ENST00000541661 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
SCARB1-207ENST00000541661 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
SCARB1-207ENST00000541661 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
SCARB1-207ENST00000541661 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
SCARB1-207ENST00000541661 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
SCARB1-207ENST00000541661 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
SCARB1-207ENST00000541661 ROMO1P60602 79 aa4.44□□□□□ -1.7
SCARB1-207ENST00000541661 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
SCARB1-207ENST00000541661 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
SCARB1-207ENST00000541661 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
SCARB1-207ENST00000541661 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
SCARB1-207ENST00000541661 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
SCARB1-207ENST00000541661 TNP1P09430 55 aa4.35□□□□□ -1.71
SCARB1-207ENST00000541661 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
SCARB1-207ENST00000541661 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
SCARB1-207ENST00000541661 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
SCARB1-207ENST00000541661 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
SCARB1-207ENST00000541661 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
SCARB1-207ENST00000541661 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
SCARB1-207ENST00000541661 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
SCARB1-207ENST00000541661 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
SCARB1-207ENST00000541661 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
SCARB1-207ENST00000541661 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
SCARB1-207ENST00000541661 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
SCARB1-207ENST00000541661 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
SCARB1-207ENST00000541661 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
SCARB1-207ENST00000541661 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
SCARB1-207ENST00000541661 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SCARB1-207ENST00000541661 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
SCARB1-207ENST00000541661 MT1AP04731 61 aa3.93□□□□□ -1.78
SCARB1-207ENST00000541661 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
SCARB1-207ENST00000541661 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
SCARB1-207ENST00000541661 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
SCARB1-207ENST00000541661 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SCARB1-207ENST00000541661 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
SCARB1-207ENST00000541661 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
SCARB1-207ENST00000541661 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SCARB1-207ENST00000541661 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
SCARB1-207ENST00000541661 MT3P25713 68 aa3.62□□□□□ -1.83
SCARB1-207ENST00000541661 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
SCARB1-207ENST00000541661 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
SCARB1-207ENST00000541661 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SCARB1-207ENST00000541661 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
SCARB1-207ENST00000541661 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
SCARB1-207ENST00000541661 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
SCARB1-207ENST00000541661 INE1O15225 51 aa3.01□□□□□ -1.93
SCARB1-207ENST00000541661 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
SCARB1-207ENST00000541661 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
SCARB1-207ENST00000541661 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
SCARB1-207ENST00000541661 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
SCARB1-207ENST00000541661 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SCARB1-207ENST00000541661 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
SCARB1-207ENST00000541661 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SCARB1-207ENST00000541661 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
SCARB1-207ENST00000541661 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SCARB1-207ENST00000541661 PRM1P04553 51 aa2.29□□□□□ -2.04
SCARB1-207ENST00000541661 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
SCARB1-207ENST00000541661 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 74.4 ms