RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
YBX3-207ENST00000539204 M0QZ58 72 aa4.61□□□□□ -1.67
YBX3-207ENST00000539204 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
YBX3-207ENST00000539204 KRTAP13-4Q3LI77 160 aa4.59□□□□□ -1.67
YBX3-207ENST00000539204 LINC01554Q52M75 96 aa4.57□□□□□ -1.68
YBX3-207ENST00000539204 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
YBX3-207ENST00000539204 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
YBX3-207ENST00000539204 K7ERS5 55 aa4.52□□□□□ -1.69
YBX3-207ENST00000539204 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
YBX3-207ENST00000539204 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
YBX3-207ENST00000539204 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
YBX3-207ENST00000539204 MT1EP04732 61 aa4.48□□□□□ -1.69
YBX3-207ENST00000539204 A0A0D9SG42 100 aa4.47□□□□□ -1.69
YBX3-207ENST00000539204 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
YBX3-207ENST00000539204 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
YBX3-207ENST00000539204 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
YBX3-207ENST00000539204 MT1GP13640 62 aa4.43□□□□□ -1.7
YBX3-207ENST00000539204 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
YBX3-207ENST00000539204 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
YBX3-207ENST00000539204 ROMO1P60602 79 aa4.34□□□□□ -1.71
YBX3-207ENST00000539204 MT1MQ8N339 61 aa4.31□□□□□ -1.72
YBX3-207ENST00000539204 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
YBX3-207ENST00000539204 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
YBX3-207ENST00000539204 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
YBX3-207ENST00000539204 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
YBX3-207ENST00000539204 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
YBX3-207ENST00000539204 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.74
YBX3-207ENST00000539204 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
YBX3-207ENST00000539204 MT1LQ93083 61 aa4.19□□□□□ -1.74
YBX3-207ENST00000539204 H3BS24 57 aa4.15□□□□□ -1.75
YBX3-207ENST00000539204 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
YBX3-207ENST00000539204 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
YBX3-207ENST00000539204 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
YBX3-207ENST00000539204 TNP1P09430 55 aa4.06□□□□□ -1.76
YBX3-207ENST00000539204 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
YBX3-207ENST00000539204 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
YBX3-207ENST00000539204 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
YBX3-207ENST00000539204 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
YBX3-207ENST00000539204 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
YBX3-207ENST00000539204 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.77
YBX3-207ENST00000539204 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
YBX3-207ENST00000539204 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
YBX3-207ENST00000539204 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
YBX3-207ENST00000539204 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
YBX3-207ENST00000539204 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
YBX3-207ENST00000539204 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
YBX3-207ENST00000539204 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
YBX3-207ENST00000539204 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
YBX3-207ENST00000539204 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
YBX3-207ENST00000539204 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
YBX3-207ENST00000539204 MT1AP04731 61 aa3.55□□□□□ -1.84
YBX3-207ENST00000539204 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
YBX3-207ENST00000539204 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
YBX3-207ENST00000539204 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
YBX3-207ENST00000539204 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
YBX3-207ENST00000539204 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
YBX3-207ENST00000539204 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
YBX3-207ENST00000539204 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
YBX3-207ENST00000539204 MT3P25713 68 aa3.31□□□□□ -1.88
YBX3-207ENST00000539204 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
YBX3-207ENST00000539204 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
YBX3-207ENST00000539204 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
YBX3-207ENST00000539204 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
YBX3-207ENST00000539204 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
YBX3-207ENST00000539204 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
YBX3-207ENST00000539204 INE1O15225 51 aa2.92□□□□□ -1.94
YBX3-207ENST00000539204 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
YBX3-207ENST00000539204 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
YBX3-207ENST00000539204 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
YBX3-207ENST00000539204 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
YBX3-207ENST00000539204 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
YBX3-207ENST00000539204 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
YBX3-207ENST00000539204 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
YBX3-207ENST00000539204 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
YBX3-207ENST00000539204 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
YBX3-207ENST00000539204 PRM1P04553 51 aa2.24□□□□□ -2.05
YBX3-207ENST00000539204 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
YBX3-207ENST00000539204 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms