RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
COPB1-209ENST00000533096 SEC61GP60059 68 aa4.4□□□□□ -1.71
COPB1-209ENST00000533096 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
COPB1-209ENST00000533096 J3QR89 54 aa4.36□□□□□ -1.71
COPB1-209ENST00000533096 SMIM20Q8N5G0 67 aa4.36□□□□□ -1.71
COPB1-209ENST00000533096 A0A1B0GU33 70 aa4.35□□□□□ -1.71
COPB1-209ENST00000533096 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
COPB1-209ENST00000533096 TNP1P09430 55 aa4.31□□□□□ -1.72
COPB1-209ENST00000533096 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
COPB1-209ENST00000533096 A0A1B0GV90 55 aa4.3□□□□□ -1.72
COPB1-209ENST00000533096 COA5Q86WW8 74 aa4.29□□□□□ -1.72
COPB1-209ENST00000533096 A8MU10 97 aa4.24□□□□□ -1.73
COPB1-209ENST00000533096 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
COPB1-209ENST00000533096 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
COPB1-209ENST00000533096 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
COPB1-209ENST00000533096 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
COPB1-209ENST00000533096 SERP2Q8N6R1 65 aa4.12□□□□□ -1.75
COPB1-209ENST00000533096 A0A1B0GU69 56 aa4.11□□□□□ -1.75
COPB1-209ENST00000533096 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
COPB1-209ENST00000533096 K7ERU9 68 aa4□□□□□ -1.77
COPB1-209ENST00000533096 KRTAP5-8O75690 187 aa4□□□□□ -1.77
COPB1-209ENST00000533096 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
COPB1-209ENST00000533096 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
COPB1-209ENST00000533096 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
COPB1-209ENST00000533096 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
COPB1-209ENST00000533096 H7BZZ5 65 aa3.88□□□□□ -1.79
COPB1-209ENST00000533096 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
COPB1-209ENST00000533096 MT1AP04731 61 aa3.87□□□□□ -1.79
COPB1-209ENST00000533096 COX7CP15954 63 aa3.86□□□□□ -1.79
COPB1-209ENST00000533096 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
COPB1-209ENST00000533096 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
COPB1-209ENST00000533096 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
COPB1-209ENST00000533096 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
COPB1-209ENST00000533096 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
COPB1-209ENST00000533096 UQCR11O14957 56 aa3.7□□□□□ -1.82
COPB1-209ENST00000533096 LINC01558Q9Y6Z2 57 aa3.69□□□□□ -1.82
COPB1-209ENST00000533096 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
COPB1-209ENST00000533096 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
COPB1-209ENST00000533096 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
COPB1-209ENST00000533096 K7ERS5 55 aa3.62□□□□□ -1.83
COPB1-209ENST00000533096 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
COPB1-209ENST00000533096 MT3P25713 68 aa3.59□□□□□ -1.83
COPB1-209ENST00000533096 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
COPB1-209ENST00000533096 CCDC179H3BU77 68 aa3.51□□□□□ -1.85
COPB1-209ENST00000533096 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
COPB1-209ENST00000533096 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
COPB1-209ENST00000533096 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
COPB1-209ENST00000533096 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
COPB1-209ENST00000533096 PCP4P48539 62 aa3.39□□□□□ -1.87
COPB1-209ENST00000533096 PSPHP1O15172 72 aa3.37□□□□□ -1.87
COPB1-209ENST00000533096 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
COPB1-209ENST00000533096 Q1T7F1 81 aa3.34□□□□□ -1.87
COPB1-209ENST00000533096 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
COPB1-209ENST00000533096 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
COPB1-209ENST00000533096 ROMO1P60602 79 aa3.29□□□□□ -1.88
COPB1-209ENST00000533096 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
COPB1-209ENST00000533096 TMEM258P61165 79 aa3.26□□□□□ -1.89
COPB1-209ENST00000533096 A6NED7 52 aa3.2□□□□□ -1.9
COPB1-209ENST00000533096 V9GYY9 64 aa3.2□□□□□ -1.9
COPB1-209ENST00000533096 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
COPB1-209ENST00000533096 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
COPB1-209ENST00000533096 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
COPB1-209ENST00000533096 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
COPB1-209ENST00000533096 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
COPB1-209ENST00000533096 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
COPB1-209ENST00000533096 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
COPB1-209ENST00000533096 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
COPB1-209ENST00000533096 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
COPB1-209ENST00000533096 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
COPB1-209ENST00000533096 BRK1Q8WUW1 75 aa2.29□□□□□ -2.04
COPB1-209ENST00000533096 PMAIP1Q13794 54 aa2.13□□□□□ -2.07
COPB1-209ENST00000533096 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
COPB1-209ENST00000533096 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
COPB1-209ENST00000533096 PRM1P04553 51 aa1.68□□□□□ -2.14
COPB1-209ENST00000533096 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
COPB1-209ENST00000533096 PRO0628Q9UI54 55 aa1.57□□□□□ -2.16
COPB1-209ENST00000533096 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
COPB1-209ENST00000533096 INE1O15225 51 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms