RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	UQCR11	O14957	56 aa		5.51	□□□□□ -1.53
TM9SF1-209	ENST00000530468		V9GYY9	64 aa		5.49	□□□□□ -1.53
TM9SF1-209	ENST00000530468		A8MU10	97 aa		5.48	□□□□□ -1.53
TM9SF1-209	ENST00000530468	KRTAP5-4	Q6L8H1	288 aa		5.47	□□□□□ -1.53
TM9SF1-209	ENST00000530468	SVIP	Q8NHG7	77 aa		5.45	□□□□□ -1.54
TM9SF1-209	ENST00000530468	KRTAP5-10	Q6L8G5	202 aa		5.43	□□□□□ -1.54
TM9SF1-209	ENST00000530468	AHNAK2	Q8IVF2	5795 aa		5.42	□□□□□ -1.54
TM9SF1-209	ENST00000530468	KRTAP4-3	Q9BYR4	195 aa		5.4	□□□□□ -1.54
TM9SF1-209	ENST00000530468	C10orf95	Q9H7T3	257 aa		5.4	□□□□□ -1.54
TM9SF1-209	ENST00000530468	KRTAP4-6	Q9BYQ5	205 aa		5.39	□□□□□ -1.55
TM9SF1-209	ENST00000530468		K7ERS5	55 aa		5.38	□□□□□ -1.55
TM9SF1-209	ENST00000530468	TNP1	P09430	55 aa		5.37	□□□□□ -1.55
TM9SF1-209	ENST00000530468	LCE3A	Q5TA76	89 aa		5.37	□□□□□ -1.55
TM9SF1-209	ENST00000530468	MIR22HG	Q0VDD5	57 aa		5.36	□□□□□ -1.55
TM9SF1-209	ENST00000530468		Q1T7F1	81 aa		5.34	□□□□□ -1.55
TM9SF1-209	ENST00000530468	PSPHP1	O15172	72 aa		5.3	□□□□□ -1.56
TM9SF1-209	ENST00000530468	PCP4	P48539	62 aa		5.26	□□□□□ -1.57
TM9SF1-209	ENST00000530468	KRTAP5-7	Q6L8G8	165 aa		5.26	□□□□□ -1.57
TM9SF1-209	ENST00000530468	KRTAP5-3	Q6L8H2	238 aa		5.24	□□□□□ -1.57
TM9SF1-209	ENST00000530468	RPS28	P62857	69 aa	Known RBP	5.23	□□□□□ -1.57
TM9SF1-209	ENST00000530468		A6NED7	52 aa		5.2	□□□□□ -1.58
TM9SF1-209	ENST00000530468	KRTAP4-7	Q9BYR0	210 aa		5.2	□□□□□ -1.58
TM9SF1-209	ENST00000530468	KRTAP12-3	P60328	96 aa		5.18	□□□□□ -1.58
TM9SF1-209	ENST00000530468	KRTAP20-2	Q3LI61	65 aa		5.18	□□□□□ -1.58
TM9SF1-209	ENST00000530468	SPRR5	A0A1B0GTR4	108 aa		5.15	□□□□□ -1.59
TM9SF1-209	ENST00000530468	KRTAP25-1	Q3LHN0	102 aa		5.14	□□□□□ -1.59
TM9SF1-209	ENST00000530468	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.13	□□□□□ -1.59
TM9SF1-209	ENST00000530468	KRTAP12-4	P60329	112 aa		5.09	□□□□□ -1.59
TM9SF1-209	ENST00000530468	CDC42SE1	Q9NRR8	79 aa		5.02	□□□□□ -1.61
TM9SF1-209	ENST00000530468	KRTAP23-1	A1A580	65 aa		4.96	□□□□□ -1.62
TM9SF1-209	ENST00000530468	LOC100996750	A0A140TA64	210 aa		4.94	□□□□□ -1.62
TM9SF1-209	ENST00000530468	KRTAP19-4	Q3LI73	84 aa		4.93	□□□□□ -1.62
TM9SF1-209	ENST00000530468	ROMO1	P60602	79 aa		4.91	□□□□□ -1.62
TM9SF1-209	ENST00000530468	SYNE1	Q8NF91	8797 aa	Known RBP	4.85	□□□□□ -1.63
TM9SF1-209	ENST00000530468	KRTAP4-11	Q9BYQ6	195 aa		4.79	□□□□□ -1.64
TM9SF1-209	ENST00000530468	KRTAP15-1	Q3LI76	137 aa		4.75	□□□□□ -1.65
TM9SF1-209	ENST00000530468	KRTAP5-2	Q701N4	177 aa		4.75	□□□□□ -1.65
TM9SF1-209	ENST00000530468	LCE3C	Q5T5A8	94 aa		4.74	□□□□□ -1.65
TM9SF1-209	ENST00000530468	MT1A	P04731	61 aa		4.7	□□□□□ -1.66
TM9SF1-209	ENST00000530468	KRTAP6-1	Q3LI64	71 aa		4.67	□□□□□ -1.66
TM9SF1-209	ENST00000530468	KRTAP5-8	O75690	187 aa		4.63	□□□□□ -1.67
TM9SF1-209	ENST00000530468	BRK1	Q8WUW1	75 aa		4.62	□□□□□ -1.67
TM9SF1-209	ENST00000530468	KRTAP9-4	Q9BYQ2	154 aa		4.57	□□□□□ -1.68
TM9SF1-209	ENST00000530468	MUC5AC	P98088	5654 aa		4.53	□□□□□ -1.68
TM9SF1-209	ENST00000530468	KRTAP6-2	Q3LI66	62 aa		4.52	□□□□□ -1.69
TM9SF1-209	ENST00000530468	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.5	□□□□□ -1.69
TM9SF1-209	ENST00000530468	AHNAK	Q09666	5890 aa	Known RBP	4.5	□□□□□ -1.69
TM9SF1-209	ENST00000530468	KRTAP9-9	Q9BYP9	154 aa		4.46	□□□□□ -1.7
TM9SF1-209	ENST00000530468	KRTAP9-6	A8MVA2	160 aa		4.45	□□□□□ -1.7
TM9SF1-209	ENST00000530468		H3BS24	57 aa		4.39	□□□□□ -1.71
TM9SF1-209	ENST00000530468	PMAIP1	Q13794	54 aa		4.39	□□□□□ -1.71
TM9SF1-209	ENST00000530468	OBSCN	Q5VST9	7968 aa		4.37	□□□□□ -1.71
TM9SF1-209	ENST00000530468	MT3	P25713	68 aa		4.33	□□□□□ -1.72
TM9SF1-209	ENST00000530468	KRTAP5-1	Q6L8H4	278 aa		4.3	□□□□□ -1.72
TM9SF1-209	ENST00000530468	PRO0628	Q9UI54	55 aa		4.15	□□□□□ -1.75
TM9SF1-209	ENST00000530468	LCE1E	Q5T753	118 aa		4.04	□□□□□ -1.76
TM9SF1-209	ENST00000530468	PRAC1	Q96KF2	57 aa		4.04	□□□□□ -1.76
TM9SF1-209	ENST00000530468		A0A0A0MQY5	61 aa		3.99	□□□□□ -1.77
TM9SF1-209	ENST00000530468	KTN1-AS1	Q86SY8	53 aa		3.94	□□□□□ -1.78
TM9SF1-209	ENST00000530468	KRTAP4-2	Q9BYR5	136 aa		3.82	□□□□□ -1.8
TM9SF1-209	ENST00000530468	LCE1B	Q5T7P3	118 aa		3.8	□□□□□ -1.8
TM9SF1-209	ENST00000530468	LCE1C	Q5T751	118 aa		3.75	□□□□□ -1.81
TM9SF1-209	ENST00000530468	LUZP6	Q538Z0	58 aa		3.64	□□□□□ -1.83
TM9SF1-209	ENST00000530468	KRTAP4-12	Q9BQ66	201 aa		3.54	□□□□□ -1.84
TM9SF1-209	ENST00000530468	KRTAP5-11	Q6L8G4	156 aa		3.43	□□□□□ -1.86
TM9SF1-209	ENST00000530468	LCE1F	Q5T754	118 aa		3.41	□□□□□ -1.86
TM9SF1-209	ENST00000530468	LCE3D	Q9BYE3	92 aa		3.41	□□□□□ -1.86
TM9SF1-209	ENST00000530468	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.38	□□□□□ -1.87
TM9SF1-209	ENST00000530468	LCE3E	Q5T5B0	92 aa		3.23	□□□□□ -1.89
TM9SF1-209	ENST00000530468	PHGR1	C9JFL3	82 aa		3.17	□□□□□ -1.9
TM9SF1-209	ENST00000530468	KRTAP21-2	Q3LI59	83 aa		3.08	□□□□□ -1.92
TM9SF1-209	ENST00000530468	NDUFAF8	A1L188	74 aa		2.92	□□□□□ -1.94
TM9SF1-209	ENST00000530468	KRTAP4-4	Q9BYR3	166 aa		2.84	□□□□□ -1.95
TM9SF1-209	ENST00000530468	MUC19	Q7Z5P9	8384 aa		2.7	□□□□□ -1.98
TM9SF1-209	ENST00000530468	PRM1	P04553	51 aa		2.47	□□□□□ -2.01
TM9SF1-209	ENST00000530468	INE1	O15225	51 aa		2.46	□□□□□ -2.02
TM9SF1-209	ENST00000530468	KRTAP21-1	Q3LI58	79 aa		2.44	□□□□□ -2.02
TM9SF1-209	ENST00000530468	MUC16	Q8WXI7	14507 aa		1.96	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 229.3 ms