RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
SYVN1-212ENST00000530451 KRTAP4-3Q9BYR4 195 aa6.76□□□□□ -1.33
SYVN1-212ENST00000530451 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
SYVN1-212ENST00000530451 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
SYVN1-212ENST00000530451 TNP1P09430 55 aa6.69□□□□□ -1.34
SYVN1-212ENST00000530451 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
SYVN1-212ENST00000530451 UQCR11O14957 56 aa6.58□□□□□ -1.36
SYVN1-212ENST00000530451 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
SYVN1-212ENST00000530451 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
SYVN1-212ENST00000530451 AHNAK2Q8IVF2 5795 aa6.53□□□□□ -1.36
SYVN1-212ENST00000530451 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
SYVN1-212ENST00000530451 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
SYVN1-212ENST00000530451 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
SYVN1-212ENST00000530451 V9GYY9 64 aa6.45□□□□□ -1.38
SYVN1-212ENST00000530451 PSPHP1O15172 72 aa6.43□□□□□ -1.38
SYVN1-212ENST00000530451 Q1T7F1 81 aa6.43□□□□□ -1.38
SYVN1-212ENST00000530451 PCP4P48539 62 aa6.31□□□□□ -1.4
SYVN1-212ENST00000530451 K7ERS5 55 aa6.28□□□□□ -1.4
SYVN1-212ENST00000530451 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
SYVN1-212ENST00000530451 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
SYVN1-212ENST00000530451 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
SYVN1-212ENST00000530451 RPS28P62857 69 aaKnown RBP6.23□□□□□ -1.41
SYVN1-212ENST00000530451 A6NED7 52 aa6.22□□□□□ -1.41
SYVN1-212ENST00000530451 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
SYVN1-212ENST00000530451 KRTAP5-7Q6L8G8 165 aa6.21□□□□□ -1.42
SYVN1-212ENST00000530451 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
SYVN1-212ENST00000530451 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
SYVN1-212ENST00000530451 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
SYVN1-212ENST00000530451 SYNE1Q8NF91 8797 aaKnown RBP6.06□□□□□ -1.44
SYVN1-212ENST00000530451 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
SYVN1-212ENST00000530451 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
SYVN1-212ENST00000530451 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
SYVN1-212ENST00000530451 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
SYVN1-212ENST00000530451 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
SYVN1-212ENST00000530451 ROMO1P60602 79 aa5.91□□□□□ -1.46
SYVN1-212ENST00000530451 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
SYVN1-212ENST00000530451 MT1AP04731 61 aa5.79□□□□□ -1.48
SYVN1-212ENST00000530451 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
SYVN1-212ENST00000530451 KRTAP5-2Q701N4 177 aa5.74□□□□□ -1.49
SYVN1-212ENST00000530451 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
SYVN1-212ENST00000530451 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
SYVN1-212ENST00000530451 KRTAP5-8O75690 187 aa5.59□□□□□ -1.51
SYVN1-212ENST00000530451 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
SYVN1-212ENST00000530451 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
SYVN1-212ENST00000530451 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
SYVN1-212ENST00000530451 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
SYVN1-212ENST00000530451 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
SYVN1-212ENST00000530451 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
SYVN1-212ENST00000530451 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
SYVN1-212ENST00000530451 MT3P25713 68 aa5.3□□□□□ -1.56
SYVN1-212ENST00000530451 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
SYVN1-212ENST00000530451 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
SYVN1-212ENST00000530451 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
SYVN1-212ENST00000530451 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
SYVN1-212ENST00000530451 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
SYVN1-212ENST00000530451 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
SYVN1-212ENST00000530451 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
SYVN1-212ENST00000530451 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
SYVN1-212ENST00000530451 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
SYVN1-212ENST00000530451 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
SYVN1-212ENST00000530451 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
SYVN1-212ENST00000530451 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
SYVN1-212ENST00000530451 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
SYVN1-212ENST00000530451 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
SYVN1-212ENST00000530451 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
SYVN1-212ENST00000530451 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
SYVN1-212ENST00000530451 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
SYVN1-212ENST00000530451 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
SYVN1-212ENST00000530451 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
SYVN1-212ENST00000530451 H3BS24 57 aa3.59□□□□□ -1.83
SYVN1-212ENST00000530451 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
SYVN1-212ENST00000530451 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
SYVN1-212ENST00000530451 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
SYVN1-212ENST00000530451 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
SYVN1-212ENST00000530451 PRM1P04553 51 aa3.03□□□□□ -1.92
SYVN1-212ENST00000530451 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
SYVN1-212ENST00000530451 INE1O15225 51 aa2.77□□□□□ -1.97
SYVN1-212ENST00000530451 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms