RNA–Protein interactions for RNA: ENST00000529539.5

CHID1-216, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-216ENST00000529539 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
CHID1-216ENST00000529539 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
CHID1-216ENST00000529539 UQCR11O14957 56 aa7.39□□□□□ -1.23
CHID1-216ENST00000529539 TMEM258P61165 79 aa7.39□□□□□ -1.23
CHID1-216ENST00000529539 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
CHID1-216ENST00000529539 KRTAP5-4Q6L8H1 288 aa7.31□□□□□ -1.24
CHID1-216ENST00000529539 KRTAP4-3Q9BYR4 195 aa7.31□□□□□ -1.24
CHID1-216ENST00000529539 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
CHID1-216ENST00000529539 MT4P47944 62 aa7.28□□□□□ -1.24
CHID1-216ENST00000529539 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
CHID1-216ENST00000529539 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
CHID1-216ENST00000529539 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
CHID1-216ENST00000529539 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
CHID1-216ENST00000529539 KRTAP4-7Q9BYR0 210 aa7.13□□□□□ -1.27
CHID1-216ENST00000529539 K7ERS5 55 aa7.11□□□□□ -1.27
CHID1-216ENST00000529539 V9GYY9 64 aa7.07□□□□□ -1.28
CHID1-216ENST00000529539 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
CHID1-216ENST00000529539 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
CHID1-216ENST00000529539 Q1T7F1 81 aa6.98□□□□□ -1.29
CHID1-216ENST00000529539 KRTAP5-5Q701N2 237 aaPredicted RBP6.98□□□□□ -1.29
CHID1-216ENST00000529539 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CHID1-216ENST00000529539 KRTAP5-10Q6L8G5 202 aa6.95□□□□□ -1.3
CHID1-216ENST00000529539 PSPHP1O15172 72 aa6.93□□□□□ -1.3
CHID1-216ENST00000529539 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
CHID1-216ENST00000529539 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
CHID1-216ENST00000529539 KRTAP20-2Q3LI61 65 aa6.86□□□□□ -1.31
CHID1-216ENST00000529539 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
CHID1-216ENST00000529539 KRTAP12-4P60329 112 aa6.83□□□□□ -1.32
CHID1-216ENST00000529539 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
CHID1-216ENST00000529539 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
CHID1-216ENST00000529539 A6NED7 52 aa6.72□□□□□ -1.33
CHID1-216ENST00000529539 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
CHID1-216ENST00000529539 KRTAP5-7Q6L8G8 165 aa6.72□□□□□ -1.33
CHID1-216ENST00000529539 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
CHID1-216ENST00000529539 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
CHID1-216ENST00000529539 ROMO1P60602 79 aa6.57□□□□□ -1.36
CHID1-216ENST00000529539 MT1AP04731 61 aa6.47□□□□□ -1.37
CHID1-216ENST00000529539 KRTAP6-1Q3LI64 71 aa6.39□□□□□ -1.39
CHID1-216ENST00000529539 KRTAP5-2Q701N4 177 aa6.39□□□□□ -1.39
CHID1-216ENST00000529539 PRO0628Q9UI54 55 aa6.32□□□□□ -1.4
CHID1-216ENST00000529539 KRTAP9-6A8MVA2 160 aa6.29□□□□□ -1.4
CHID1-216ENST00000529539 KRTAP4-11Q9BYQ6 195 aa6.29□□□□□ -1.4
CHID1-216ENST00000529539 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
CHID1-216ENST00000529539 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
CHID1-216ENST00000529539 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
CHID1-216ENST00000529539 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
CHID1-216ENST00000529539 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
CHID1-216ENST00000529539 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
CHID1-216ENST00000529539 MT3P25713 68 aa5.94□□□□□ -1.46
CHID1-216ENST00000529539 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
CHID1-216ENST00000529539 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
CHID1-216ENST00000529539 MUC5ACP98088 5654 aa5.83□□□□□ -1.48
CHID1-216ENST00000529539 AHNAKQ09666 5890 aaKnown RBP5.81□□□□□ -1.48
CHID1-216ENST00000529539 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
CHID1-216ENST00000529539 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
CHID1-216ENST00000529539 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
CHID1-216ENST00000529539 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
CHID1-216ENST00000529539 LCE1EQ5T753 118 aa5.52□□□□□ -1.53
CHID1-216ENST00000529539 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
CHID1-216ENST00000529539 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
CHID1-216ENST00000529539 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
CHID1-216ENST00000529539 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
CHID1-216ENST00000529539 H3BS24 57 aa4.7□□□□□ -1.66
CHID1-216ENST00000529539 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
CHID1-216ENST00000529539 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
CHID1-216ENST00000529539 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
CHID1-216ENST00000529539 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
CHID1-216ENST00000529539 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
CHID1-216ENST00000529539 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
CHID1-216ENST00000529539 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
CHID1-216ENST00000529539 KRTAP21-2Q3LI59 83 aa4.23□□□□□ -1.73
CHID1-216ENST00000529539 PHGR1C9JFL3 82 aa4.02□□□□□ -1.77
CHID1-216ENST00000529539 INE1O15225 51 aa3.91□□□□□ -1.78
CHID1-216ENST00000529539 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
CHID1-216ENST00000529539 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
CHID1-216ENST00000529539 PRM1P04553 51 aa3.31□□□□□ -1.88
CHID1-216ENST00000529539 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
CHID1-216ENST00000529539 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms