RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 MT1MQ8N339 61 aa5.57□□□□□ -1.52
CTSB-215ENST00000528965 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
CTSB-215ENST00000528965 HMCN1Q96RW7 5635 aa5.55□□□□□ -1.52
CTSB-215ENST00000528965 MT1LQ93083 61 aa5.54□□□□□ -1.52
CTSB-215ENST00000528965 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
CTSB-215ENST00000528965 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
CTSB-215ENST00000528965 K7ERS5 55 aa5.48□□□□□ -1.53
CTSB-215ENST00000528965 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
CTSB-215ENST00000528965 V9GYY9 64 aa5.48□□□□□ -1.53
CTSB-215ENST00000528965 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
CTSB-215ENST00000528965 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
CTSB-215ENST00000528965 PSPHP1O15172 72 aa5.41□□□□□ -1.54
CTSB-215ENST00000528965 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
CTSB-215ENST00000528965 KRTAP5-7Q6L8G8 165 aa5.39□□□□□ -1.55
CTSB-215ENST00000528965 Q1T7F1 81 aa5.35□□□□□ -1.55
CTSB-215ENST00000528965 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
CTSB-215ENST00000528965 PCP4P48539 62 aa5.31□□□□□ -1.56
CTSB-215ENST00000528965 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
CTSB-215ENST00000528965 A6NED7 52 aa5.28□□□□□ -1.56
CTSB-215ENST00000528965 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
CTSB-215ENST00000528965 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
CTSB-215ENST00000528965 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
CTSB-215ENST00000528965 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
CTSB-215ENST00000528965 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
CTSB-215ENST00000528965 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
CTSB-215ENST00000528965 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
CTSB-215ENST00000528965 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
CTSB-215ENST00000528965 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
CTSB-215ENST00000528965 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
CTSB-215ENST00000528965 ROMO1P60602 79 aa5□□□□□ -1.61
CTSB-215ENST00000528965 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
CTSB-215ENST00000528965 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
CTSB-215ENST00000528965 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
CTSB-215ENST00000528965 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
CTSB-215ENST00000528965 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
CTSB-215ENST00000528965 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
CTSB-215ENST00000528965 MT1AP04731 61 aa4.73□□□□□ -1.65
CTSB-215ENST00000528965 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
CTSB-215ENST00000528965 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.66
CTSB-215ENST00000528965 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
CTSB-215ENST00000528965 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
CTSB-215ENST00000528965 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
CTSB-215ENST00000528965 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
CTSB-215ENST00000528965 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
CTSB-215ENST00000528965 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
CTSB-215ENST00000528965 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
CTSB-215ENST00000528965 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
CTSB-215ENST00000528965 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
CTSB-215ENST00000528965 MT3P25713 68 aa4.35□□□□□ -1.71
CTSB-215ENST00000528965 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
CTSB-215ENST00000528965 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
CTSB-215ENST00000528965 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
CTSB-215ENST00000528965 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
CTSB-215ENST00000528965 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
CTSB-215ENST00000528965 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
CTSB-215ENST00000528965 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CTSB-215ENST00000528965 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
CTSB-215ENST00000528965 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CTSB-215ENST00000528965 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
CTSB-215ENST00000528965 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CTSB-215ENST00000528965 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CTSB-215ENST00000528965 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
CTSB-215ENST00000528965 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
CTSB-215ENST00000528965 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
CTSB-215ENST00000528965 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CTSB-215ENST00000528965 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
CTSB-215ENST00000528965 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
CTSB-215ENST00000528965 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
CTSB-215ENST00000528965 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
CTSB-215ENST00000528965 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
CTSB-215ENST00000528965 H3BS24 57 aa2.89□□□□□ -1.95
CTSB-215ENST00000528965 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
CTSB-215ENST00000528965 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
CTSB-215ENST00000528965 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
CTSB-215ENST00000528965 PRM1P04553 51 aa2.55□□□□□ -2
CTSB-215ENST00000528965 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CTSB-215ENST00000528965 INE1O15225 51 aa2.31□□□□□ -2.04
CTSB-215ENST00000528965 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 69.7 ms