RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SRPRA-202ENST00000527817 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
SRPRA-202ENST00000527817 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
SRPRA-202ENST00000527817 COA5Q86WW8 74 aa4.08□□□□□ -1.76
SRPRA-202ENST00000527817 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
SRPRA-202ENST00000527817 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
SRPRA-202ENST00000527817 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
SRPRA-202ENST00000527817 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
SRPRA-202ENST00000527817 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
SRPRA-202ENST00000527817 TNP1P09430 55 aa3.97□□□□□ -1.77
SRPRA-202ENST00000527817 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
SRPRA-202ENST00000527817 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SRPRA-202ENST00000527817 SEC61GP60059 68 aa3.96□□□□□ -1.78
SRPRA-202ENST00000527817 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
SRPRA-202ENST00000527817 A0A1B0GU33 70 aa3.94□□□□□ -1.78
SRPRA-202ENST00000527817 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
SRPRA-202ENST00000527817 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
SRPRA-202ENST00000527817 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
SRPRA-202ENST00000527817 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
SRPRA-202ENST00000527817 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
SRPRA-202ENST00000527817 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
SRPRA-202ENST00000527817 Q1T7F1 81 aa3.86□□□□□ -1.79
SRPRA-202ENST00000527817 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
SRPRA-202ENST00000527817 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
SRPRA-202ENST00000527817 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
SRPRA-202ENST00000527817 A0A1B0GU69 56 aa3.81□□□□□ -1.8
SRPRA-202ENST00000527817 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
SRPRA-202ENST00000527817 V9GYY9 64 aa3.8□□□□□ -1.8
SRPRA-202ENST00000527817 PSPHP1O15172 72 aa3.78□□□□□ -1.8
SRPRA-202ENST00000527817 A8MU10 97 aa3.77□□□□□ -1.81
SRPRA-202ENST00000527817 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
SRPRA-202ENST00000527817 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SRPRA-202ENST00000527817 UQCR11O14957 56 aa3.68□□□□□ -1.82
SRPRA-202ENST00000527817 MT1AP04731 61 aa3.67□□□□□ -1.82
SRPRA-202ENST00000527817 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
SRPRA-202ENST00000527817 A6NED7 52 aa3.64□□□□□ -1.83
SRPRA-202ENST00000527817 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
SRPRA-202ENST00000527817 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
SRPRA-202ENST00000527817 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
SRPRA-202ENST00000527817 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SRPRA-202ENST00000527817 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
SRPRA-202ENST00000527817 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
SRPRA-202ENST00000527817 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
SRPRA-202ENST00000527817 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
SRPRA-202ENST00000527817 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SRPRA-202ENST00000527817 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
SRPRA-202ENST00000527817 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
SRPRA-202ENST00000527817 K7ERS5 55 aa3.42□□□□□ -1.86
SRPRA-202ENST00000527817 MT3P25713 68 aa3.4□□□□□ -1.87
SRPRA-202ENST00000527817 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
SRPRA-202ENST00000527817 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
SRPRA-202ENST00000527817 ROMO1P60602 79 aa3.34□□□□□ -1.87
SRPRA-202ENST00000527817 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
SRPRA-202ENST00000527817 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SRPRA-202ENST00000527817 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
SRPRA-202ENST00000527817 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
SRPRA-202ENST00000527817 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
SRPRA-202ENST00000527817 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SRPRA-202ENST00000527817 LCE1CQ5T751 118 aa3□□□□□ -1.93
SRPRA-202ENST00000527817 SVIPQ8NHG7 77 aa2.92□□□□□ -1.94
SRPRA-202ENST00000527817 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
SRPRA-202ENST00000527817 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
SRPRA-202ENST00000527817 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SRPRA-202ENST00000527817 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
SRPRA-202ENST00000527817 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
SRPRA-202ENST00000527817 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SRPRA-202ENST00000527817 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
SRPRA-202ENST00000527817 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
SRPRA-202ENST00000527817 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
SRPRA-202ENST00000527817 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
SRPRA-202ENST00000527817 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
SRPRA-202ENST00000527817 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SRPRA-202ENST00000527817 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SRPRA-202ENST00000527817 A0A0A0MQY5 61 aa2.02□□□□□ -2.09
SRPRA-202ENST00000527817 H3BS24 57 aa1.97□□□□□ -2.09
SRPRA-202ENST00000527817 INE1O15225 51 aa1.96□□□□□ -2.1
SRPRA-202ENST00000527817 PRM1P04553 51 aa1.75□□□□□ -2.13
SRPRA-202ENST00000527817 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms