RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 MT1MQ8N339 61 aa7.97□□□□□ -1.13
LMNB2-204ENST00000527409 Q1T7F1 81 aa7.92□□□□□ -1.14
LMNB2-204ENST00000527409 K7ERS5 55 aa7.9□□□□□ -1.14
LMNB2-204ENST00000527409 PSPHP1O15172 72 aa7.9□□□□□ -1.14
LMNB2-204ENST00000527409 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
LMNB2-204ENST00000527409 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
LMNB2-204ENST00000527409 KRTAP4-9Q9BYQ8 210 aa7.76□□□□□ -1.17
LMNB2-204ENST00000527409 GPR98Q8WXG9 6306 aa7.76□□□□□ -1.17
LMNB2-204ENST00000527409 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
LMNB2-204ENST00000527409 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
LMNB2-204ENST00000527409 A6NED7 52 aa7.66□□□□□ -1.18
LMNB2-204ENST00000527409 PCP4P48539 62 aa7.62□□□□□ -1.19
LMNB2-204ENST00000527409 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
LMNB2-204ENST00000527409 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
LMNB2-204ENST00000527409 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
LMNB2-204ENST00000527409 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
LMNB2-204ENST00000527409 MT4P47944 62 aa7.54□□□□□ -1.2
LMNB2-204ENST00000527409 KRTAP5-4Q6L8H1 288 aa7.54□□□□□ -1.2
LMNB2-204ENST00000527409 HMCN1Q96RW7 5635 aa7.5□□□□□ -1.21
LMNB2-204ENST00000527409 CDC42SE1Q9NRR8 79 aa7.47□□□□□ -1.21
LMNB2-204ENST00000527409 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
LMNB2-204ENST00000527409 ROMO1P60602 79 aa7.35□□□□□ -1.23
LMNB2-204ENST00000527409 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
LMNB2-204ENST00000527409 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
LMNB2-204ENST00000527409 KRTAP5-5Q701N2 237 aaPredicted RBP7.3□□□□□ -1.24
LMNB2-204ENST00000527409 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
LMNB2-204ENST00000527409 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
LMNB2-204ENST00000527409 AHNAK2Q8IVF2 5795 aa7.16□□□□□ -1.26
LMNB2-204ENST00000527409 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
LMNB2-204ENST00000527409 KRTAP20-2Q3LI61 65 aa7.11□□□□□ -1.27
LMNB2-204ENST00000527409 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
LMNB2-204ENST00000527409 KRTAP5-10Q6L8G5 202 aa7.1□□□□□ -1.27
LMNB2-204ENST00000527409 SYNE1Q8NF91 8797 aaKnown RBP6.98□□□□□ -1.29
LMNB2-204ENST00000527409 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
LMNB2-204ENST00000527409 KRTAP5-7Q6L8G8 165 aa6.87□□□□□ -1.31
LMNB2-204ENST00000527409 MT1AP04731 61 aa6.84□□□□□ -1.31
LMNB2-204ENST00000527409 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
LMNB2-204ENST00000527409 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
LMNB2-204ENST00000527409 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
LMNB2-204ENST00000527409 KRTAP5-2Q701N4 177 aa6.63□□□□□ -1.35
LMNB2-204ENST00000527409 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
LMNB2-204ENST00000527409 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
LMNB2-204ENST00000527409 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
LMNB2-204ENST00000527409 MT3P25713 68 aa6.26□□□□□ -1.41
LMNB2-204ENST00000527409 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
LMNB2-204ENST00000527409 KRTAP5-8O75690 187 aa6.24□□□□□ -1.41
LMNB2-204ENST00000527409 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
LMNB2-204ENST00000527409 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
LMNB2-204ENST00000527409 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
LMNB2-204ENST00000527409 MUC5ACP98088 5654 aa5.95□□□□□ -1.46
LMNB2-204ENST00000527409 MUC5BQ9HC84 5762 aaPredicted RBP5.91□□□□□ -1.46
LMNB2-204ENST00000527409 AHNAKQ09666 5890 aaKnown RBP5.91□□□□□ -1.46
LMNB2-204ENST00000527409 KRTAP5-1Q6L8H4 278 aa5.91□□□□□ -1.46
LMNB2-204ENST00000527409 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
LMNB2-204ENST00000527409 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
LMNB2-204ENST00000527409 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
LMNB2-204ENST00000527409 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
LMNB2-204ENST00000527409 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
LMNB2-204ENST00000527409 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
LMNB2-204ENST00000527409 LCE1CQ5T751 118 aa5.32□□□□□ -1.56
LMNB2-204ENST00000527409 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
LMNB2-204ENST00000527409 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
LMNB2-204ENST00000527409 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
LMNB2-204ENST00000527409 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
LMNB2-204ENST00000527409 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
LMNB2-204ENST00000527409 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
LMNB2-204ENST00000527409 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
LMNB2-204ENST00000527409 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
LMNB2-204ENST00000527409 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
LMNB2-204ENST00000527409 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
LMNB2-204ENST00000527409 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
LMNB2-204ENST00000527409 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
LMNB2-204ENST00000527409 PRM1P04553 51 aa3.74□□□□□ -1.81
LMNB2-204ENST00000527409 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
LMNB2-204ENST00000527409 INE1O15225 51 aa3.53□□□□□ -1.84
LMNB2-204ENST00000527409 H3BS24 57 aa3.31□□□□□ -1.88
LMNB2-204ENST00000527409 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
LMNB2-204ENST00000527409 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 115.2 ms