RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 COA5Q86WW8 74 aa5.83□□□□□ -1.48
CHMP4A-203ENST00000527154 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
CHMP4A-203ENST00000527154 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
CHMP4A-203ENST00000527154 SEC61GP60059 68 aa5.75□□□□□ -1.49
CHMP4A-203ENST00000527154 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
CHMP4A-203ENST00000527154 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
CHMP4A-203ENST00000527154 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
CHMP4A-203ENST00000527154 MT1LQ93083 61 aa5.71□□□□□ -1.5
CHMP4A-203ENST00000527154 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
CHMP4A-203ENST00000527154 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
CHMP4A-203ENST00000527154 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
CHMP4A-203ENST00000527154 A0A0D9SG42 100 aa5.59□□□□□ -1.51
CHMP4A-203ENST00000527154 PSPHP1O15172 72 aa5.58□□□□□ -1.52
CHMP4A-203ENST00000527154 A0A1B0GU33 70 aa5.57□□□□□ -1.52
CHMP4A-203ENST00000527154 A0A1B0GU69 56 aa5.55□□□□□ -1.52
CHMP4A-203ENST00000527154 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
CHMP4A-203ENST00000527154 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
CHMP4A-203ENST00000527154 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
CHMP4A-203ENST00000527154 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
CHMP4A-203ENST00000527154 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
CHMP4A-203ENST00000527154 A6NED7 52 aa5.46□□□□□ -1.54
CHMP4A-203ENST00000527154 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
CHMP4A-203ENST00000527154 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
CHMP4A-203ENST00000527154 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
CHMP4A-203ENST00000527154 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
CHMP4A-203ENST00000527154 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
CHMP4A-203ENST00000527154 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
CHMP4A-203ENST00000527154 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
CHMP4A-203ENST00000527154 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
CHMP4A-203ENST00000527154 A8MU10 97 aa5.36□□□□□ -1.55
CHMP4A-203ENST00000527154 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
CHMP4A-203ENST00000527154 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
CHMP4A-203ENST00000527154 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
CHMP4A-203ENST00000527154 UQCR11O14957 56 aa5.28□□□□□ -1.56
CHMP4A-203ENST00000527154 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
CHMP4A-203ENST00000527154 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
CHMP4A-203ENST00000527154 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
CHMP4A-203ENST00000527154 TNP1P09430 55 aa5.19□□□□□ -1.58
CHMP4A-203ENST00000527154 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
CHMP4A-203ENST00000527154 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
CHMP4A-203ENST00000527154 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
CHMP4A-203ENST00000527154 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
CHMP4A-203ENST00000527154 K7ERS5 55 aa5.1□□□□□ -1.59
CHMP4A-203ENST00000527154 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
CHMP4A-203ENST00000527154 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
CHMP4A-203ENST00000527154 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
CHMP4A-203ENST00000527154 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
CHMP4A-203ENST00000527154 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CHMP4A-203ENST00000527154 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
CHMP4A-203ENST00000527154 MT1AP04731 61 aa4.85□□□□□ -1.63
CHMP4A-203ENST00000527154 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
CHMP4A-203ENST00000527154 ROMO1P60602 79 aa4.81□□□□□ -1.64
CHMP4A-203ENST00000527154 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
CHMP4A-203ENST00000527154 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
CHMP4A-203ENST00000527154 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
CHMP4A-203ENST00000527154 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
CHMP4A-203ENST00000527154 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
CHMP4A-203ENST00000527154 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
CHMP4A-203ENST00000527154 MT3P25713 68 aa4.44□□□□□ -1.7
CHMP4A-203ENST00000527154 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
CHMP4A-203ENST00000527154 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
CHMP4A-203ENST00000527154 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
CHMP4A-203ENST00000527154 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
CHMP4A-203ENST00000527154 LCE1CQ5T751 118 aa4□□□□□ -1.77
CHMP4A-203ENST00000527154 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
CHMP4A-203ENST00000527154 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
CHMP4A-203ENST00000527154 INE1O15225 51 aa3.76□□□□□ -1.81
CHMP4A-203ENST00000527154 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
CHMP4A-203ENST00000527154 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
CHMP4A-203ENST00000527154 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-203ENST00000527154 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
CHMP4A-203ENST00000527154 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
CHMP4A-203ENST00000527154 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CHMP4A-203ENST00000527154 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CHMP4A-203ENST00000527154 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
CHMP4A-203ENST00000527154 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
CHMP4A-203ENST00000527154 PRM1P04553 51 aa2.46□□□□□ -2.02
CHMP4A-203ENST00000527154 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 116.8 ms