RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 SEC61GP60059 68 aa4.62□□□□□ -1.67
CLNS1A-202ENST00000525064 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
CLNS1A-202ENST00000525064 SPTSSBQ8NFR3 76 aa4.59□□□□□ -1.67
CLNS1A-202ENST00000525064 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
CLNS1A-202ENST00000525064 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
CLNS1A-202ENST00000525064 A8MU10 97 aa4.52□□□□□ -1.69
CLNS1A-202ENST00000525064 A0A1B0GU69 56 aa4.49□□□□□ -1.69
CLNS1A-202ENST00000525064 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
CLNS1A-202ENST00000525064 UQCR11O14957 56 aa4.44□□□□□ -1.7
CLNS1A-202ENST00000525064 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
CLNS1A-202ENST00000525064 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
CLNS1A-202ENST00000525064 MT1EP04732 61 aa4.42□□□□□ -1.7
CLNS1A-202ENST00000525064 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
CLNS1A-202ENST00000525064 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
CLNS1A-202ENST00000525064 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CLNS1A-202ENST00000525064 A0A0D9SG42 100 aa4.36□□□□□ -1.71
CLNS1A-202ENST00000525064 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
CLNS1A-202ENST00000525064 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
CLNS1A-202ENST00000525064 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
CLNS1A-202ENST00000525064 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
CLNS1A-202ENST00000525064 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
CLNS1A-202ENST00000525064 A0A1B0GU33 70 aa4.24□□□□□ -1.73
CLNS1A-202ENST00000525064 MT1GP13640 62 aa4.24□□□□□ -1.73
CLNS1A-202ENST00000525064 MT1MQ8N339 61 aa4.22□□□□□ -1.73
CLNS1A-202ENST00000525064 K7ERS5 55 aa4.21□□□□□ -1.74
CLNS1A-202ENST00000525064 MT1LQ93083 61 aa4.2□□□□□ -1.74
CLNS1A-202ENST00000525064 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
CLNS1A-202ENST00000525064 MT4P47944 62 aa4.18□□□□□ -1.74
CLNS1A-202ENST00000525064 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
CLNS1A-202ENST00000525064 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
CLNS1A-202ENST00000525064 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
CLNS1A-202ENST00000525064 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
CLNS1A-202ENST00000525064 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
CLNS1A-202ENST00000525064 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
CLNS1A-202ENST00000525064 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
CLNS1A-202ENST00000525064 TNP1P09430 55 aa4.05□□□□□ -1.76
CLNS1A-202ENST00000525064 ROMO1P60602 79 aa4.05□□□□□ -1.76
CLNS1A-202ENST00000525064 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
CLNS1A-202ENST00000525064 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
CLNS1A-202ENST00000525064 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
CLNS1A-202ENST00000525064 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
CLNS1A-202ENST00000525064 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
CLNS1A-202ENST00000525064 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-202ENST00000525064 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
CLNS1A-202ENST00000525064 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
CLNS1A-202ENST00000525064 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
CLNS1A-202ENST00000525064 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
CLNS1A-202ENST00000525064 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-202ENST00000525064 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
CLNS1A-202ENST00000525064 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
CLNS1A-202ENST00000525064 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
CLNS1A-202ENST00000525064 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CLNS1A-202ENST00000525064 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CLNS1A-202ENST00000525064 MT1AP04731 61 aa3.56□□□□□ -1.84
CLNS1A-202ENST00000525064 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-202ENST00000525064 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
CLNS1A-202ENST00000525064 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
CLNS1A-202ENST00000525064 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
CLNS1A-202ENST00000525064 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-202ENST00000525064 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
CLNS1A-202ENST00000525064 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
CLNS1A-202ENST00000525064 MT3P25713 68 aa3.43□□□□□ -1.86
CLNS1A-202ENST00000525064 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
CLNS1A-202ENST00000525064 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CLNS1A-202ENST00000525064 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
CLNS1A-202ENST00000525064 INE1O15225 51 aa3.08□□□□□ -1.92
CLNS1A-202ENST00000525064 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
CLNS1A-202ENST00000525064 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
CLNS1A-202ENST00000525064 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
CLNS1A-202ENST00000525064 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
CLNS1A-202ENST00000525064 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
CLNS1A-202ENST00000525064 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CLNS1A-202ENST00000525064 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
CLNS1A-202ENST00000525064 PRM1P04553 51 aa2.11□□□□□ -2.07
CLNS1A-202ENST00000525064 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CLNS1A-202ENST00000525064 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CLNS1A-202ENST00000525064 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 108.1 ms