RNA–Protein interactions for RNA: ENST00000523985.5

CCNC-217, Transcript of cyclin C, humanhuman

TSL 2 BASIC

Gene CCNC, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-217ENST00000523985 Q1T7F1 81 aa5.5□□□□□ -1.53
CCNC-217ENST00000523985 TNP1P09430 55 aa5.45□□□□□ -1.54
CCNC-217ENST00000523985 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
CCNC-217ENST00000523985 SPRR2DP22532 72 aa5.43□□□□□ -1.54
CCNC-217ENST00000523985 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
CCNC-217ENST00000523985 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
CCNC-217ENST00000523985 K7ERS5 55 aa5.4□□□□□ -1.54
CCNC-217ENST00000523985 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
CCNC-217ENST00000523985 PSPHP1O15172 72 aa5.38□□□□□ -1.55
CCNC-217ENST00000523985 PCP4P48539 62 aa5.38□□□□□ -1.55
CCNC-217ENST00000523985 MT1EP04732 61 aa5.36□□□□□ -1.55
CCNC-217ENST00000523985 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
CCNC-217ENST00000523985 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
CCNC-217ENST00000523985 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
CCNC-217ENST00000523985 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
CCNC-217ENST00000523985 MT1GP13640 62 aa5.26□□□□□ -1.57
CCNC-217ENST00000523985 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
CCNC-217ENST00000523985 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
CCNC-217ENST00000523985 A6NED7 52 aa5.25□□□□□ -1.57
CCNC-217ENST00000523985 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
CCNC-217ENST00000523985 MT1LQ93083 61 aa5.16□□□□□ -1.58
CCNC-217ENST00000523985 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
CCNC-217ENST00000523985 MT1MQ8N339 61 aa5.09□□□□□ -1.59
CCNC-217ENST00000523985 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
CCNC-217ENST00000523985 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
CCNC-217ENST00000523985 ROMO1P60602 79 aa5□□□□□ -1.61
CCNC-217ENST00000523985 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
CCNC-217ENST00000523985 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
CCNC-217ENST00000523985 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
CCNC-217ENST00000523985 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
CCNC-217ENST00000523985 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
CCNC-217ENST00000523985 MT4P47944 62 aa4.68□□□□□ -1.66
CCNC-217ENST00000523985 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
CCNC-217ENST00000523985 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
CCNC-217ENST00000523985 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.67
CCNC-217ENST00000523985 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
CCNC-217ENST00000523985 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
CCNC-217ENST00000523985 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
CCNC-217ENST00000523985 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
CCNC-217ENST00000523985 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
CCNC-217ENST00000523985 MT1AP04731 61 aa4.41□□□□□ -1.7
CCNC-217ENST00000523985 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
CCNC-217ENST00000523985 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.7
CCNC-217ENST00000523985 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
CCNC-217ENST00000523985 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
CCNC-217ENST00000523985 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
CCNC-217ENST00000523985 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
CCNC-217ENST00000523985 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
CCNC-217ENST00000523985 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
CCNC-217ENST00000523985 MT3P25713 68 aa4.24□□□□□ -1.73
CCNC-217ENST00000523985 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
CCNC-217ENST00000523985 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
CCNC-217ENST00000523985 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
CCNC-217ENST00000523985 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
CCNC-217ENST00000523985 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CCNC-217ENST00000523985 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
CCNC-217ENST00000523985 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
CCNC-217ENST00000523985 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
CCNC-217ENST00000523985 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CCNC-217ENST00000523985 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
CCNC-217ENST00000523985 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
CCNC-217ENST00000523985 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
CCNC-217ENST00000523985 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
CCNC-217ENST00000523985 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
CCNC-217ENST00000523985 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
CCNC-217ENST00000523985 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CCNC-217ENST00000523985 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CCNC-217ENST00000523985 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
CCNC-217ENST00000523985 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
CCNC-217ENST00000523985 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
CCNC-217ENST00000523985 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CCNC-217ENST00000523985 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
CCNC-217ENST00000523985 INE1O15225 51 aa2.51□□□□□ -2.01
CCNC-217ENST00000523985 PRM1P04553 51 aa2.5□□□□□ -2.01
CCNC-217ENST00000523985 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CCNC-217ENST00000523985 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CCNC-217ENST00000523985 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms