RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 Q1T7F1 81 aa4.06□□□□□ -1.76
NDRG1-228ENST00000523931 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
NDRG1-228ENST00000523931 A0A0D9SG42 100 aa4.03□□□□□ -1.76
NDRG1-228ENST00000523931 UQCR11O14957 56 aa4.01□□□□□ -1.77
NDRG1-228ENST00000523931 PSPHP1O15172 72 aa3.99□□□□□ -1.77
NDRG1-228ENST00000523931 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
NDRG1-228ENST00000523931 A8MU10 97 aa3.97□□□□□ -1.77
NDRG1-228ENST00000523931 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
NDRG1-228ENST00000523931 MT4P47944 62 aa3.96□□□□□ -1.78
NDRG1-228ENST00000523931 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
NDRG1-228ENST00000523931 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
NDRG1-228ENST00000523931 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
NDRG1-228ENST00000523931 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
NDRG1-228ENST00000523931 A6NED7 52 aa3.89□□□□□ -1.79
NDRG1-228ENST00000523931 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
NDRG1-228ENST00000523931 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
NDRG1-228ENST00000523931 K7ERS5 55 aa3.84□□□□□ -1.79
NDRG1-228ENST00000523931 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
NDRG1-228ENST00000523931 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
NDRG1-228ENST00000523931 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
NDRG1-228ENST00000523931 TNP1P09430 55 aa3.73□□□□□ -1.81
NDRG1-228ENST00000523931 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
NDRG1-228ENST00000523931 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
NDRG1-228ENST00000523931 MT1EP04732 61 aa3.65□□□□□ -1.83
NDRG1-228ENST00000523931 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
NDRG1-228ENST00000523931 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
NDRG1-228ENST00000523931 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
NDRG1-228ENST00000523931 ROMO1P60602 79 aa3.61□□□□□ -1.83
NDRG1-228ENST00000523931 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
NDRG1-228ENST00000523931 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
NDRG1-228ENST00000523931 MT1GP13640 62 aa3.58□□□□□ -1.84
NDRG1-228ENST00000523931 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
NDRG1-228ENST00000523931 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
NDRG1-228ENST00000523931 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
NDRG1-228ENST00000523931 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
NDRG1-228ENST00000523931 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
NDRG1-228ENST00000523931 MT1MQ8N339 61 aa3.52□□□□□ -1.85
NDRG1-228ENST00000523931 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
NDRG1-228ENST00000523931 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
NDRG1-228ENST00000523931 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
NDRG1-228ENST00000523931 MT1LQ93083 61 aa3.46□□□□□ -1.86
NDRG1-228ENST00000523931 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
NDRG1-228ENST00000523931 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
NDRG1-228ENST00000523931 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
NDRG1-228ENST00000523931 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
NDRG1-228ENST00000523931 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
NDRG1-228ENST00000523931 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
NDRG1-228ENST00000523931 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
NDRG1-228ENST00000523931 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
NDRG1-228ENST00000523931 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
NDRG1-228ENST00000523931 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
NDRG1-228ENST00000523931 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
NDRG1-228ENST00000523931 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
NDRG1-228ENST00000523931 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
NDRG1-228ENST00000523931 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
NDRG1-228ENST00000523931 SVIPQ8NHG7 77 aa3.03□□□□□ -1.92
NDRG1-228ENST00000523931 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
NDRG1-228ENST00000523931 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
NDRG1-228ENST00000523931 MT1AP04731 61 aa2.96□□□□□ -1.94
NDRG1-228ENST00000523931 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
NDRG1-228ENST00000523931 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
NDRG1-228ENST00000523931 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
NDRG1-228ENST00000523931 MT3P25713 68 aa2.71□□□□□ -1.98
NDRG1-228ENST00000523931 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
NDRG1-228ENST00000523931 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
NDRG1-228ENST00000523931 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
NDRG1-228ENST00000523931 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
NDRG1-228ENST00000523931 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
NDRG1-228ENST00000523931 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
NDRG1-228ENST00000523931 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
NDRG1-228ENST00000523931 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
NDRG1-228ENST00000523931 A0A0A0MQY5 61 aa2.08□□□□□ -2.08
NDRG1-228ENST00000523931 INE1O15225 51 aa2.01□□□□□ -2.09
NDRG1-228ENST00000523931 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
NDRG1-228ENST00000523931 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
NDRG1-228ENST00000523931 PRM1P04553 51 aa1.85□□□□□ -2.11
NDRG1-228ENST00000523931 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
NDRG1-228ENST00000523931 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms