RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
TNFRSF10B-206ENST00000520109 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
TNFRSF10B-206ENST00000520109 MT4P47944 62 aa6.66□□□□□ -1.34
TNFRSF10B-206ENST00000520109 UQCR11O14957 56 aa6.62□□□□□ -1.35
TNFRSF10B-206ENST00000520109 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
TNFRSF10B-206ENST00000520109 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
TNFRSF10B-206ENST00000520109 HMCN1Q96RW7 5635 aa6.53□□□□□ -1.36
TNFRSF10B-206ENST00000520109 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
TNFRSF10B-206ENST00000520109 V9GYY9 64 aa6.52□□□□□ -1.37
TNFRSF10B-206ENST00000520109 K7ERS5 55 aa6.48□□□□□ -1.37
TNFRSF10B-206ENST00000520109 Q1T7F1 81 aa6.48□□□□□ -1.37
TNFRSF10B-206ENST00000520109 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
TNFRSF10B-206ENST00000520109 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
TNFRSF10B-206ENST00000520109 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
TNFRSF10B-206ENST00000520109 PSPHP1O15172 72 aa6.38□□□□□ -1.39
TNFRSF10B-206ENST00000520109 PCP4P48539 62 aa6.38□□□□□ -1.39
TNFRSF10B-206ENST00000520109 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
TNFRSF10B-206ENST00000520109 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
TNFRSF10B-206ENST00000520109 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
TNFRSF10B-206ENST00000520109 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
TNFRSF10B-206ENST00000520109 AHNAK2Q8IVF2 5795 aa6.26□□□□□ -1.41
TNFRSF10B-206ENST00000520109 KRTAP12-4P60329 112 aa6.26□□□□□ -1.41
TNFRSF10B-206ENST00000520109 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
TNFRSF10B-206ENST00000520109 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
TNFRSF10B-206ENST00000520109 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
TNFRSF10B-206ENST00000520109 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
TNFRSF10B-206ENST00000520109 A6NED7 52 aa6.2□□□□□ -1.42
TNFRSF10B-206ENST00000520109 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
TNFRSF10B-206ENST00000520109 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
TNFRSF10B-206ENST00000520109 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
TNFRSF10B-206ENST00000520109 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
TNFRSF10B-206ENST00000520109 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
TNFRSF10B-206ENST00000520109 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
TNFRSF10B-206ENST00000520109 ROMO1P60602 79 aa5.88□□□□□ -1.47
TNFRSF10B-206ENST00000520109 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.48
TNFRSF10B-206ENST00000520109 MT1AP04731 61 aa5.81□□□□□ -1.48
TNFRSF10B-206ENST00000520109 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
TNFRSF10B-206ENST00000520109 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
TNFRSF10B-206ENST00000520109 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
TNFRSF10B-206ENST00000520109 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
TNFRSF10B-206ENST00000520109 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
TNFRSF10B-206ENST00000520109 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
TNFRSF10B-206ENST00000520109 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
TNFRSF10B-206ENST00000520109 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
TNFRSF10B-206ENST00000520109 MT3P25713 68 aa5.39□□□□□ -1.55
TNFRSF10B-206ENST00000520109 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
TNFRSF10B-206ENST00000520109 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
TNFRSF10B-206ENST00000520109 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
TNFRSF10B-206ENST00000520109 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
TNFRSF10B-206ENST00000520109 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
TNFRSF10B-206ENST00000520109 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
TNFRSF10B-206ENST00000520109 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
TNFRSF10B-206ENST00000520109 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
TNFRSF10B-206ENST00000520109 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
TNFRSF10B-206ENST00000520109 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
TNFRSF10B-206ENST00000520109 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
TNFRSF10B-206ENST00000520109 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
TNFRSF10B-206ENST00000520109 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
TNFRSF10B-206ENST00000520109 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
TNFRSF10B-206ENST00000520109 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
TNFRSF10B-206ENST00000520109 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
TNFRSF10B-206ENST00000520109 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
TNFRSF10B-206ENST00000520109 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
TNFRSF10B-206ENST00000520109 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
TNFRSF10B-206ENST00000520109 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
TNFRSF10B-206ENST00000520109 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
TNFRSF10B-206ENST00000520109 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
TNFRSF10B-206ENST00000520109 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
TNFRSF10B-206ENST00000520109 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
TNFRSF10B-206ENST00000520109 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
TNFRSF10B-206ENST00000520109 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
TNFRSF10B-206ENST00000520109 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
TNFRSF10B-206ENST00000520109 H3BS24 57 aa3.26□□□□□ -1.89
TNFRSF10B-206ENST00000520109 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
TNFRSF10B-206ENST00000520109 PRM1P04553 51 aa3□□□□□ -1.93
TNFRSF10B-206ENST00000520109 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
TNFRSF10B-206ENST00000520109 INE1O15225 51 aa2.89□□□□□ -1.95
TNFRSF10B-206ENST00000520109 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms