RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885		K7ERS5	55 aa		8.58	□□□□□ -1.04
CNOT7-204	ENST00000518885	MT1M	Q8N339	61 aa		8.55	□□□□□ -1.04
CNOT7-204	ENST00000518885		Q1T7F1	81 aa		8.44	□□□□□ -1.06
CNOT7-204	ENST00000518885	KRTAP25-1	Q3LHN0	102 aa		8.44	□□□□□ -1.06
CNOT7-204	ENST00000518885	PSPHP1	O15172	72 aa		8.43	□□□□□ -1.06
CNOT7-204	ENST00000518885	KRTAP12-3	P60328	96 aa		8.43	□□□□□ -1.06
CNOT7-204	ENST00000518885	KRTAP4-9	Q9BYQ8	210 aa		8.38	□□□□□ -1.07
CNOT7-204	ENST00000518885	LCE4A	Q5TA78	99 aa		8.33	□□□□□ -1.08
CNOT7-204	ENST00000518885	KRTAP4-3	Q9BYR4	195 aa		8.25	□□□□□ -1.09
CNOT7-204	ENST00000518885	LCE1D	Q5T752	114 aa		8.23	□□□□□ -1.09
CNOT7-204	ENST00000518885		A6NED7	52 aa		8.22	□□□□□ -1.09
CNOT7-204	ENST00000518885	GPR98	Q8WXG9	6306 aa		8.21	□□□□□ -1.1
CNOT7-204	ENST00000518885	MT4	P47944	62 aa		8.16	□□□□□ -1.1
CNOT7-204	ENST00000518885	HMCN1	Q96RW7	5635 aa		8.16	□□□□□ -1.1
CNOT7-204	ENST00000518885	KRTAP23-1	A1A580	65 aa		8.13	□□□□□ -1.11
CNOT7-204	ENST00000518885	KRTAP5-4	Q6L8H1	288 aa		8.1	□□□□□ -1.11
CNOT7-204	ENST00000518885	KRTAP19-4	Q3LI73	84 aa		8.09	□□□□□ -1.11
CNOT7-204	ENST00000518885	KRTAP4-7	Q9BYR0	210 aa		8.09	□□□□□ -1.11
CNOT7-204	ENST00000518885	RPS28	P62857	69 aa	Known RBP	8.06	□□□□□ -1.12
CNOT7-204	ENST00000518885	CDC42SE1	Q9NRR8	79 aa		8.05	□□□□□ -1.12
CNOT7-204	ENST00000518885	PCP4	P48539	62 aa		7.91	□□□□□ -1.14
CNOT7-204	ENST00000518885	KRTAP15-1	Q3LI76	137 aa		7.9	□□□□□ -1.14
CNOT7-204	ENST00000518885	ROMO1	P60602	79 aa		7.89	□□□□□ -1.15
CNOT7-204	ENST00000518885	KRTAP4-6	Q9BYQ5	205 aa		7.87	□□□□□ -1.15
CNOT7-204	ENST00000518885	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.81	□□□□□ -1.16
CNOT7-204	ENST00000518885	AHNAK2	Q8IVF2	5795 aa		7.79	□□□□□ -1.16
CNOT7-204	ENST00000518885	LCE3C	Q5T5A8	94 aa		7.76	□□□□□ -1.17
CNOT7-204	ENST00000518885	KRTAP12-4	P60329	112 aa		7.73	□□□□□ -1.17
CNOT7-204	ENST00000518885	SPRR5	A0A1B0GTR4	108 aa		7.7	□□□□□ -1.18
CNOT7-204	ENST00000518885	LOC100996750	A0A140TA64	210 aa		7.67	□□□□□ -1.18
CNOT7-204	ENST00000518885	KRTAP20-2	Q3LI61	65 aa		7.66	□□□□□ -1.18
CNOT7-204	ENST00000518885	KRTAP5-10	Q6L8G5	202 aa		7.59	□□□□□ -1.19
CNOT7-204	ENST00000518885	KRTAP5-3	Q6L8H2	238 aa		7.45	□□□□□ -1.22
CNOT7-204	ENST00000518885	SYNE1	Q8NF91	8797 aa	Known RBP	7.41	□□□□□ -1.22
CNOT7-204	ENST00000518885	MT1A	P04731	61 aa		7.34	□□□□□ -1.23
CNOT7-204	ENST00000518885	KRTAP5-7	Q6L8G8	165 aa		7.33	□□□□□ -1.24
CNOT7-204	ENST00000518885	KRTAP6-1	Q3LI64	71 aa		7.24	□□□□□ -1.25
CNOT7-204	ENST00000518885	KRTAP9-6	A8MVA2	160 aa		7.18	□□□□□ -1.26
CNOT7-204	ENST00000518885	KRTAP5-2	Q701N4	177 aa		7.11	□□□□□ -1.27
CNOT7-204	ENST00000518885	KRTAP9-4	Q9BYQ2	154 aa		7.09	□□□□□ -1.27
CNOT7-204	ENST00000518885	BRK1	Q8WUW1	75 aa		7.08	□□□□□ -1.28
CNOT7-204	ENST00000518885	KRTAP4-11	Q9BYQ6	195 aa		6.99	□□□□□ -1.29
CNOT7-204	ENST00000518885	KRTAP6-2	Q3LI66	62 aa		6.93	□□□□□ -1.3
CNOT7-204	ENST00000518885	MT3	P25713	68 aa		6.77	□□□□□ -1.33
CNOT7-204	ENST00000518885	KRTAP5-8	O75690	187 aa		6.71	□□□□□ -1.34
CNOT7-204	ENST00000518885	PMAIP1	Q13794	54 aa		6.67	□□□□□ -1.34
CNOT7-204	ENST00000518885	OBSCN	Q5VST9	7968 aa		6.64	□□□□□ -1.35
CNOT7-204	ENST00000518885	KRTAP9-9	Q9BYP9	154 aa		6.45	□□□□□ -1.38
CNOT7-204	ENST00000518885	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.45	□□□□□ -1.38
CNOT7-204	ENST00000518885	AHNAK	Q09666	5890 aa	Known RBP	6.43	□□□□□ -1.38
CNOT7-204	ENST00000518885	MUC5AC	P98088	5654 aa		6.42	□□□□□ -1.38
CNOT7-204	ENST00000518885	KRTAP5-1	Q6L8H4	278 aa		6.34	□□□□□ -1.39
CNOT7-204	ENST00000518885	PRAC1	Q96KF2	57 aa		6.3	□□□□□ -1.4
CNOT7-204	ENST00000518885	LCE1E	Q5T753	118 aa		6.2	□□□□□ -1.42
CNOT7-204	ENST00000518885	PRO0628	Q9UI54	55 aa		6.17	□□□□□ -1.42
CNOT7-204	ENST00000518885	KTN1-AS1	Q86SY8	53 aa		5.92	□□□□□ -1.46
CNOT7-204	ENST00000518885	LCE1B	Q5T7P3	118 aa		5.79	□□□□□ -1.48
CNOT7-204	ENST00000518885	LCE1C	Q5T751	118 aa		5.74	□□□□□ -1.49
CNOT7-204	ENST00000518885	KRTAP4-2	Q9BYR5	136 aa		5.74	□□□□□ -1.49
CNOT7-204	ENST00000518885	SVIP	Q8NHG7	77 aa		5.72	□□□□□ -1.49
CNOT7-204	ENST00000518885	LCE3D	Q9BYE3	92 aa		5.64	□□□□□ -1.51
CNOT7-204	ENST00000518885	LUZP6	Q538Z0	58 aa		5.55	□□□□□ -1.52
CNOT7-204	ENST00000518885	LCE3E	Q5T5B0	92 aa		5.31	□□□□□ -1.56
CNOT7-204	ENST00000518885	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.21	□□□□□ -1.58
CNOT7-204	ENST00000518885	KRTAP5-11	Q6L8G4	156 aa		5.18	□□□□□ -1.58
CNOT7-204	ENST00000518885	KRTAP4-12	Q9BQ66	201 aa		5.16	□□□□□ -1.58
CNOT7-204	ENST00000518885	LCE1F	Q5T754	118 aa		5.08	□□□□□ -1.6
CNOT7-204	ENST00000518885	KRTAP21-2	Q3LI59	83 aa		4.76	□□□□□ -1.65
CNOT7-204	ENST00000518885		H3BS24	57 aa		4.56	□□□□□ -1.68
CNOT7-204	ENST00000518885	PHGR1	C9JFL3	82 aa		4.46	□□□□□ -1.7
CNOT7-204	ENST00000518885	KRTAP4-4	Q9BYR3	166 aa		4.32	□□□□□ -1.72
CNOT7-204	ENST00000518885	NDUFAF8	A1L188	74 aa		4.31	□□□□□ -1.72
CNOT7-204	ENST00000518885	MUC19	Q7Z5P9	8384 aa		4.06	□□□□□ -1.76
CNOT7-204	ENST00000518885	PRM1	P04553	51 aa		3.98	□□□□□ -1.77
CNOT7-204	ENST00000518885	INE1	O15225	51 aa		3.55	□□□□□ -1.84
CNOT7-204	ENST00000518885		A0A0A0MQY5	61 aa		3.5	□□□□□ -1.85
CNOT7-204	ENST00000518885	KRTAP21-1	Q3LI58	79 aa		3.43	□□□□□ -1.86
CNOT7-204	ENST00000518885	MUC16	Q8WXI7	14507 aa		2.88	□□□□□ -1.95

Retrieved 78 of 20,778 RNA–protein pairs in 102.7 ms