RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
SH2D4A-202ENST00000518040 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
SH2D4A-202ENST00000518040 MT3P25713 68 aa3.94□□□□□ -1.78
SH2D4A-202ENST00000518040 A6NED7 52 aa3.93□□□□□ -1.78
SH2D4A-202ENST00000518040 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
SH2D4A-202ENST00000518040 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
SH2D4A-202ENST00000518040 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SH2D4A-202ENST00000518040 A8MU10 97 aa3.87□□□□□ -1.79
SH2D4A-202ENST00000518040 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
SH2D4A-202ENST00000518040 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
SH2D4A-202ENST00000518040 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
SH2D4A-202ENST00000518040 R4GN34 69 aa3.84□□□□□ -1.79
SH2D4A-202ENST00000518040 MT4P47944 62 aa3.8□□□□□ -1.8
SH2D4A-202ENST00000518040 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
SH2D4A-202ENST00000518040 A0A1B0GU69 56 aa3.79□□□□□ -1.8
SH2D4A-202ENST00000518040 P0C880 135 aa3.78□□□□□ -1.8
SH2D4A-202ENST00000518040 M0QZ58 72 aa3.76□□□□□ -1.81
SH2D4A-202ENST00000518040 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
SH2D4A-202ENST00000518040 SPATA8Q6RVD6 105 aa3.73□□□□□ -1.81
SH2D4A-202ENST00000518040 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
SH2D4A-202ENST00000518040 A0A1B0GU33 70 aa3.71□□□□□ -1.81
SH2D4A-202ENST00000518040 UQCR11O14957 56 aa3.7□□□□□ -1.82
SH2D4A-202ENST00000518040 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SH2D4A-202ENST00000518040 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
SH2D4A-202ENST00000518040 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
SH2D4A-202ENST00000518040 MT1EP04732 61 aa3.67□□□□□ -1.82
SH2D4A-202ENST00000518040 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
SH2D4A-202ENST00000518040 ROMO1P60602 79 aa3.66□□□□□ -1.82
SH2D4A-202ENST00000518040 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
SH2D4A-202ENST00000518040 KRTAP13-4Q3LI77 160 aa3.65□□□□□ -1.83
SH2D4A-202ENST00000518040 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
SH2D4A-202ENST00000518040 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
SH2D4A-202ENST00000518040 MT1GP13640 62 aa3.64□□□□□ -1.83
SH2D4A-202ENST00000518040 A0A0D9SG42 100 aa3.6□□□□□ -1.83
SH2D4A-202ENST00000518040 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
SH2D4A-202ENST00000518040 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
SH2D4A-202ENST00000518040 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SH2D4A-202ENST00000518040 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
SH2D4A-202ENST00000518040 MT1MQ8N339 61 aa3.52□□□□□ -1.85
SH2D4A-202ENST00000518040 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
SH2D4A-202ENST00000518040 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SH2D4A-202ENST00000518040 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
SH2D4A-202ENST00000518040 K7ERS5 55 aa3.49□□□□□ -1.85
SH2D4A-202ENST00000518040 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.85
SH2D4A-202ENST00000518040 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
SH2D4A-202ENST00000518040 MT1LQ93083 61 aa3.43□□□□□ -1.86
SH2D4A-202ENST00000518040 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.86
SH2D4A-202ENST00000518040 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
SH2D4A-202ENST00000518040 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
SH2D4A-202ENST00000518040 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
SH2D4A-202ENST00000518040 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
SH2D4A-202ENST00000518040 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
SH2D4A-202ENST00000518040 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
SH2D4A-202ENST00000518040 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
SH2D4A-202ENST00000518040 TNP1P09430 55 aa3.29□□□□□ -1.88
SH2D4A-202ENST00000518040 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
SH2D4A-202ENST00000518040 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
SH2D4A-202ENST00000518040 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SH2D4A-202ENST00000518040 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
SH2D4A-202ENST00000518040 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
SH2D4A-202ENST00000518040 LCE3AQ5TA76 89 aa3.15□□□□□ -1.9
SH2D4A-202ENST00000518040 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
SH2D4A-202ENST00000518040 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
SH2D4A-202ENST00000518040 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
SH2D4A-202ENST00000518040 MT1AP04731 61 aa2.93□□□□□ -1.94
SH2D4A-202ENST00000518040 INE1O15225 51 aa2.91□□□□□ -1.94
SH2D4A-202ENST00000518040 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
SH2D4A-202ENST00000518040 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
SH2D4A-202ENST00000518040 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
SH2D4A-202ENST00000518040 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
SH2D4A-202ENST00000518040 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.04
SH2D4A-202ENST00000518040 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SH2D4A-202ENST00000518040 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SH2D4A-202ENST00000518040 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SH2D4A-202ENST00000518040 PRM1P04553 51 aa1.78□□□□□ -2.12
SH2D4A-202ENST00000518040 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SH2D4A-202ENST00000518040 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 142.3 ms