RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 KRTAP4-9Q9BYQ8 210 aa8.73□□□□□ -1.01
PVT1-204ENST00000517525 MIR22HGQ0VDD5 57 aa8.65□□□□□ -1.02
PVT1-204ENST00000517525 V9GYY9 64 aa8.62□□□□□ -1.03
PVT1-204ENST00000517525 Q1T7F1 81 aa8.56□□□□□ -1.04
PVT1-204ENST00000517525 KRTAP12-3P60328 96 aa8.53□□□□□ -1.04
PVT1-204ENST00000517525 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
PVT1-204ENST00000517525 K7ERS5 55 aa8.48□□□□□ -1.05
PVT1-204ENST00000517525 PSPHP1O15172 72 aa8.47□□□□□ -1.05
PVT1-204ENST00000517525 LCE4AQ5TA78 99 aa8.46□□□□□ -1.06
PVT1-204ENST00000517525 LCE1DQ5T752 114 aa8.44□□□□□ -1.06
PVT1-204ENST00000517525 KRTAP4-3Q9BYR4 195 aa8.44□□□□□ -1.06
PVT1-204ENST00000517525 KRTAP5-4Q6L8H1 288 aa8.34□□□□□ -1.07
PVT1-204ENST00000517525 MT4P47944 62 aa8.29□□□□□ -1.08
PVT1-204ENST00000517525 KRTAP4-7Q9BYR0 210 aa8.28□□□□□ -1.08
PVT1-204ENST00000517525 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
PVT1-204ENST00000517525 HMCN1Q96RW7 5635 aa8.24□□□□□ -1.09
PVT1-204ENST00000517525 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
PVT1-204ENST00000517525 A6NED7 52 aa8.2□□□□□ -1.1
PVT1-204ENST00000517525 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
PVT1-204ENST00000517525 AHNAK2Q8IVF2 5795 aa8.14□□□□□ -1.11
PVT1-204ENST00000517525 KRTAP5-10Q6L8G5 202 aa8.1□□□□□ -1.11
PVT1-204ENST00000517525 KRTAP4-6Q9BYQ5 205 aa8.06□□□□□ -1.12
PVT1-204ENST00000517525 KRTAP5-5Q701N2 237 aaPredicted RBP8.04□□□□□ -1.12
PVT1-204ENST00000517525 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
PVT1-204ENST00000517525 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
PVT1-204ENST00000517525 PCP4P48539 62 aa7.97□□□□□ -1.13
PVT1-204ENST00000517525 ROMO1P60602 79 aa7.93□□□□□ -1.14
PVT1-204ENST00000517525 LCE3CQ5T5A8 94 aa7.87□□□□□ -1.15
PVT1-204ENST00000517525 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
PVT1-204ENST00000517525 KRTAP5-7Q6L8G8 165 aa7.85□□□□□ -1.15
PVT1-204ENST00000517525 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
PVT1-204ENST00000517525 KRTAP20-2Q3LI61 65 aa7.81□□□□□ -1.16
PVT1-204ENST00000517525 KRTAP12-4P60329 112 aa7.78□□□□□ -1.16
PVT1-204ENST00000517525 KRTAP5-3Q6L8H2 238 aa7.78□□□□□ -1.16
PVT1-204ENST00000517525 SYNE1Q8NF91 8797 aaKnown RBP7.66□□□□□ -1.18
PVT1-204ENST00000517525 MT1AP04731 61 aa7.49□□□□□ -1.21
PVT1-204ENST00000517525 KRTAP9-6A8MVA2 160 aa7.42□□□□□ -1.22
PVT1-204ENST00000517525 KRTAP6-1Q3LI64 71 aa7.4□□□□□ -1.22
PVT1-204ENST00000517525 KRTAP5-2Q701N4 177 aa7.33□□□□□ -1.24
PVT1-204ENST00000517525 KRTAP9-4Q9BYQ2 154 aa7.23□□□□□ -1.25
PVT1-204ENST00000517525 KRTAP4-11Q9BYQ6 195 aa7.12□□□□□ -1.27
PVT1-204ENST00000517525 KRTAP6-2Q3LI66 62 aa7.05□□□□□ -1.28
PVT1-204ENST00000517525 BRK1Q8WUW1 75 aa7.04□□□□□ -1.28
PVT1-204ENST00000517525 KRTAP5-8O75690 187 aa6.89□□□□□ -1.31
PVT1-204ENST00000517525 MT3P25713 68 aa6.85□□□□□ -1.31
PVT1-204ENST00000517525 MUC5ACP98088 5654 aa6.78□□□□□ -1.32
PVT1-204ENST00000517525 AHNAKQ09666 5890 aaKnown RBP6.75□□□□□ -1.33
PVT1-204ENST00000517525 MUC5BQ9HC84 5762 aaPredicted RBP6.74□□□□□ -1.33
PVT1-204ENST00000517525 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
PVT1-204ENST00000517525 OBSCNQ5VST9 7968 aa6.63□□□□□ -1.35
PVT1-204ENST00000517525 KRTAP9-9Q9BYP9 154 aa6.59□□□□□ -1.35
PVT1-204ENST00000517525 KRTAP5-1Q6L8H4 278 aa6.53□□□□□ -1.36
PVT1-204ENST00000517525 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
PVT1-204ENST00000517525 LCE1EQ5T753 118 aa6.34□□□□□ -1.39
PVT1-204ENST00000517525 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
PVT1-204ENST00000517525 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
PVT1-204ENST00000517525 KTN1-AS1Q86SY8 53 aa5.91□□□□□ -1.46
PVT1-204ENST00000517525 LCE1CQ5T751 118 aa5.86□□□□□ -1.47
PVT1-204ENST00000517525 LCE1BQ5T7P3 118 aa5.86□□□□□ -1.47
PVT1-204ENST00000517525 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
PVT1-204ENST00000517525 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
PVT1-204ENST00000517525 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
PVT1-204ENST00000517525 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
PVT1-204ENST00000517525 LCE3EQ5T5B0 92 aa5.36□□□□□ -1.55
PVT1-204ENST00000517525 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
PVT1-204ENST00000517525 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
PVT1-204ENST00000517525 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
PVT1-204ENST00000517525 KRTAP21-2Q3LI59 83 aa4.92□□□□□ -1.62
PVT1-204ENST00000517525 PHGR1C9JFL3 82 aa4.75□□□□□ -1.65
PVT1-204ENST00000517525 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
PVT1-204ENST00000517525 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
PVT1-204ENST00000517525 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
PVT1-204ENST00000517525 PRM1P04553 51 aa4.01□□□□□ -1.77
PVT1-204ENST00000517525 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
PVT1-204ENST00000517525 INE1O15225 51 aa3.51□□□□□ -1.85
PVT1-204ENST00000517525 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
PVT1-204ENST00000517525 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
PVT1-204ENST00000517525 H3BS24 57 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms